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The map label for this gene is tfaE [H]

Identifier: 209398490

GI number: 209398490

Start: 309303

End: 309896

Strand: Direct

Name: tfaE [H]

Synonym: ECH74115_0300

Alternate gene names: 209398490

Gene position: 309303-309896 (Clockwise)

Preceding gene: 209399869

Following gene: 209397552

Centisome position: 5.55

GC content: 49.33

Gene sequence:

>594_bases
ATGAAACCTGTTTTTGATGAAAATGGGCTGGCTACAGTGCCGGGCGATATGCGTTGTTTTTATTATGATGCTGAAACATC
TGAGTATACGGGCTGGTCTGATGAATATATTAATACTGGCGTAAGTATGCCCGCCTGTTCCACTGGTATTGACCCTGGCG
AAAACATTCCGGGAAGAGTGGCAGTATTTACAGGTAAGGGATGGAGCCATGAAGAAGACCATCGCAATGAGACTGTTTAC
TCAATCGAAAATGGCGCAGCTGTTACAGTGGATTATATCGGTGCCATCAAAGACGGTTATGTCACGATTTCACCGTTAAC
GCCATACGATAAATGGGATGGTGAGAAATGGGTGACAGACACTGAGGCACAACACAGTGCCGCAGTAGACGCGGCAGAAG
CACAGCGCCAATCACTGATTGATGCAGCAATGGCTTCCATTAGTCTGATTCAGCTGAAGTTACAGGCCGGACGGAAACTG
ACTCAGGCAGAAACAACCCGACTTAACGCCGTGCTGGATTACATTGACGCGGTGACGGCAACAGATACCAGCACCGCGCC
GGATGTCATCTGGCCTGAACTGCCGGAGGCGTAG

Upstream 100 bases:

>100_bases
CACGATTTAATTTCACCAGTAACTCTGTGGGTGATGGTGTGAATTTTGTTGCAGTCAGACCGCGAAATATTGCATTTAAC
TTTCTGGTGAGGGCTAAATA

Downstream 100 bases:

>100_bases
GCCATTCAATATCTGGCGCACCGGAAGTATCGACCAGCTCCAGTGCGTCCAGATAATCCAGCCACAAATTATATTGCGTC
AGTTCGTCACCTTTCAGACG

Product: Tail fiber assembly protein homolog

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKPVFDENGLATVPGDMRCFYYDAETSEYTGWSDEYINTGVSMPACSTGIDPGENIPGRVAVFTGKGWSHEEDHRNETVY
SIENGAAVTVDYIGAIKDGYVTISPLTPYDKWDGEKWVTDTEAQHSAAVDAAEAQRQSLIDAAMASISLIQLKLQAGRKL
TQAETTRLNAVLDYIDAVTATDTSTAPDVIWPELPEA

Sequences:

>Translated_197_residues
MKPVFDENGLATVPGDMRCFYYDAETSEYTGWSDEYINTGVSMPACSTGIDPGENIPGRVAVFTGKGWSHEEDHRNETVY
SIENGAAVTVDYIGAIKDGYVTISPLTPYDKWDGEKWVTDTEAQHSAAVDAAEAQRQSLIDAAMASISLIQLKLQAGRKL
TQAETTRLNAVLDYIDAVTATDTSTAPDVIWPELPEA
>Mature_197_residues
MKPVFDENGLATVPGDMRCFYYDAETSEYTGWSDEYINTGVSMPACSTGIDPGENIPGRVAVFTGKGWSHEEDHRNETVY
SIENGAAVTVDYIGAIKDGYVTISPLTPYDKWDGEKWVTDTEAQHSAAVDAAEAQRQSLIDAAMASISLIQLKLQAGRKL
TQAETTRLNAVLDYIDAVTATDTSTAPDVIWPELPEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tfa family [H]

Homologues:

Organism=Escherichia coli, GI1787402, Length=200, Percent_Identity=65.5, Blast_Score=246, Evalue=7e-67,
Organism=Escherichia coli, GI1787637, Length=190, Percent_Identity=33.1578947368421, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI2367120, Length=190, Percent_Identity=33.1578947368421, Blast_Score=98, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003458 [H]

Pfam domain/function: PF02413 Caudo_TAP [H]

EC number: NA

Molecular weight: Translated: 21431; Mature: 21431

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPVFDENGLATVPGDMRCFYYDAETSEYTGWSDEYINTGVSMPACSTGIDPGENIPGRV
CCCCCCCCCCEECCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEE
AVFTGKGWSHEEDHRNETVYSIENGAAVTVDYIGAIKDGYVTISPLTPYDKWDGEKWVTD
EEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCC
TEAQHSAAVDAAEAQRQSLIDAAMASISLIQLKLQAGRKLTQAETTRLNAVLDYIDAVTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCHHHHHHHHHHHHHHHHHHHC
TDTSTAPDVIWPELPEA
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKPVFDENGLATVPGDMRCFYYDAETSEYTGWSDEYINTGVSMPACSTGIDPGENIPGRV
CCCCCCCCCCEECCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEE
AVFTGKGWSHEEDHRNETVYSIENGAAVTVDYIGAIKDGYVTISPLTPYDKWDGEKWVTD
EEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCC
TEAQHSAAVDAAEAQRQSLIDAAMASISLIQLKLQAGRKLTQAETTRLNAVLDYIDAVTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCHHHHHHHHHHHHHHHHHHHC
TDTSTAPDVIWPELPEA
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3894006; 9278503 [H]