Click here to switch to the map view.

The map label for this gene is ugpA

Identifier: 209398466

GI number: 209398466

Start: 4410763

End: 4411650

Strand: Reverse

Name: ugpA

Synonym: ECH74115_4766

Alternate gene names: 209398466

Gene position: 4411650-4410763 (Counterclockwise)

Preceding gene: 209400161

Following gene: 209399034

Centisome position: 79.17

GC content: 55.86

Gene sequence:

>888_bases
ATGTCATCATCCCGTCCGGTGTTCCGCTCGCGCTGGCTGCCTTATCTGCTGGTCGCGCCGCAGCTCATCATCACCGTTAT
CTTTTTTATCTGGCCTGCGGGCGAAGCGTTGTGGTACTCGCTGCAAAGCGTCGATCCGTTTGGTTTCTCCAGCCGGTTTG
TCGGCCTGGATAACTTCGTCGCGCTGTTTCATGACAGCTACTATATCGACTCCTTCTGGACGACGATAAAATTCAGCACC
TTTGTCACCGTCAGCGGTTTGCTGGTATCGCTGTTCTTTGCGGCGCTGGTGGAGTACATCGTGCGCGGCAGTCGTTTCTA
TCAAACCTTGATGCTGCTGCCGTATGCCGTGGCTCCCGCCGTTGCCGCCGTATTGTGGATCTTCCTGTTTAACCCCGGTC
GCGGGCTGATCACCCATTTTCTCGCTGAGTTCGGCTACGACTGGAACCACGCGCAAAACAGCGGTCAGGCAATGTTTCTG
GTGGTGTTTGCCTCAGTATGGAAGCAAATCAGCTACAACTTCCTGTTCTTCTATGCCGCGCTGCAATCCATTCCCCGTTC
GTTGATCGAAGCCGCAGCCATCGACGGTGCAGGGCCGATTCGCCGCTTCTTTAAGATTGCGCTGCCGCTTATCGCCCCGG
TGAGTTTCTTCCTGCTGGTAGTGAACCTGGTGTATGCCTTCTTCGACACCTTCCCGGTGATCGACGCCGCCACGTCCGGC
GGGCCGGTTCAGGCCACCACTACGCTGATTTATAAGATCTACCGCGAAGGCTTTACCGGACTGGATCTGGCTTCGTCTGC
CGCACAGTCGGTGGTGTTGATGTTCCTCGTCATCGTGCTGACGGTGATGCAGTTCCGCTATGTTGAAAGCAAGGTGCGTT
ACCAATGA

Upstream 100 bases:

>100_bases
TAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCA
CAGTTCAGGAATTAACCGTA

Downstream 100 bases:

>100_bases
TTGAGAACCGTCCGTGGCTGACGATATTCAGCCATACCATGCTGATCCTCGGGATCGCGGTGATCCTATTCCCGCTGTAC
GTGGCGTTTGTCGCGGCGAC

Product: glycerol-3-phosphate transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSSSRPVFRSRWLPYLLVAPQLIITVIFFIWPAGEALWYSLQSVDPFGFSSRFVGLDNFVALFHDSYYIDSFWTTIKFST
FVTVSGLLVSLFFAALVEYIVRGSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFL
VVFASVWKQISYNFLFFYAALQSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFLLVVNLVYAFFDTFPVIDAATSG
GPVQATTTLIYKIYREGFTGLDLASSAAQSVVLMFLVIVLTVMQFRYVESKVRYQ

Sequences:

>Translated_295_residues
MSSSRPVFRSRWLPYLLVAPQLIITVIFFIWPAGEALWYSLQSVDPFGFSSRFVGLDNFVALFHDSYYIDSFWTTIKFST
FVTVSGLLVSLFFAALVEYIVRGSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFL
VVFASVWKQISYNFLFFYAALQSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFLLVVNLVYAFFDTFPVIDAATSG
GPVQATTTLIYKIYREGFTGLDLASSAAQSVVLMFLVIVLTVMQFRYVESKVRYQ
>Mature_294_residues
SSSRPVFRSRWLPYLLVAPQLIITVIFFIWPAGEALWYSLQSVDPFGFSSRFVGLDNFVALFHDSYYIDSFWTTIKFSTF
VTVSGLLVSLFFAALVEYIVRGSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFLV
VFASVWKQISYNFLFFYAALQSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFLLVVNLVYAFFDTFPVIDAATSGG
PVQATTTLIYKIYREGFTGLDLASSAAQSVVLMFLVIVLTVMQFRYVESKVRYQ

Specific function: Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain

Homologues:

Organism=Escherichia coli, GI1789861, Length=295, Percent_Identity=98.6440677966102, Blast_Score=579, Evalue=1e-167,
Organism=Escherichia coli, GI1787570, Length=246, Percent_Identity=31.7073170731707, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1790465, Length=262, Percent_Identity=31.2977099236641, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UGPA_ECO57 (Q7AA80)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   B86012
- PIR:   B91166
- RefSeq:   NP_289997.1
- RefSeq:   NP_312325.1
- ProteinModelPortal:   Q7AA80
- SMR:   Q7AA80
- EnsemblBacteria:   EBESCT00000027314
- EnsemblBacteria:   EBESCT00000055826
- GeneID:   915848
- GeneID:   958958
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z4820
- KEGG:   ecs:ECs4298
- GeneTree:   EBGT00050000008928
- HOGENOM:   HBG739365
- OMA:   PYYLDSF
- ProtClustDB:   PRK10561
- BioCyc:   ECOL83334:ECS4298-MONOMER
- InterPro:   IPR000515

Pfam domain/function: PF00528 BPD_transp_1

EC number: NA

Molecular weight: Translated: 33294; Mature: 33163

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x119b084c)-; HASH(0x11900dcc)-; HASH(0x11ba063c)-; HASH(0x1183b070)-; HASH(0x11ea54ec)-; HASH(0x120249bc)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
SSSRPVFRSRWLPYLLVAPQLIITVIFFIWPAGEALWYSLQSVDPFGFSSRFVGLDNFV
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHH
ALFHDSYYIDSFWTTIKFSTFVTVSGLLVSLFFAALVEYIVRGSRFYQTLMLLPYAVAPA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFYAA
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LQSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFLLVVNLVYAFFDTFPVIDAATSG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GPVQATTTLIYKIYREGFTGLDLASSAAQSVVLMFLVIVLTVMQFRYVESKVRYQ
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796