| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is yhhQ [H]
Identifier: 209398450
GI number: 209398450
Start: 4431544
End: 4432209
Strand: Direct
Name: yhhQ [H]
Synonym: ECH74115_4791
Alternate gene names: 209398450
Gene position: 4431544-4432209 (Clockwise)
Preceding gene: 209400548
Following gene: 209400444
Centisome position: 79.53
GC content: 51.05
Gene sequence:
>666_bases ATGAACGTTTTCTCGCAAACTCAACGCTATAAGGCGTTGTTCTGGTTATCGTTATTTCATCTGCTGGTGATCACCTCCAG TAACTATCTGGTTCAGCTTCCCGTCTCCATTTTTGGTTTCCATACCACCTGGGGCGCGTTTAGCTTTCCGTTTATCTTTC TCGCTACCGACCTGACCGTACGTATTTTTGGCGCACCGCTGGCCCGTCGTATCATCTTTGCGGTGATGATCCCGGCATTG CTGATCTCCTACGTCATCTCGTCGCTATTCTATATGGGTTCATGGCAGGGATTCGGCGCACTCGCCCACTTCAACCTGTT TGTCGCCCGTATCGCCACCGCCAGTTTCATGGCCTACGCGCTGGGACAGATCCTCGACGTGCACGTTTTTAACCGCCTGC GTCAGAGTCGCCGCTGGTGGCTGGCACCGACAGCGTCCACACTGTTCGGTAACGTCAGCGACACGCTGGCCTTTTTCTTC ATTGCCTTCTGGCGTAGCCCGGATGCCTTTATGGCTGAACACTGGATGGAAATCGCGCTGGTCGATTACTGTTTCAAAGT GTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCG AAATCAACGCTTTGCAGGCGAGTTAA
Upstream 100 bases:
>100_bases GCGGCTCGAAAAAAGGGTAAGCACGTTATTATGTTAAGGTAACAGACGTGTCGTACGTATTGGGTTCCCTCACCCCAATG GTTAATCAAAAAGGTACAAT
Downstream 100 bases:
>100_bases AGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAA TCTGGTTAAATATGTCGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPAL LISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYALGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFF IAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINALQAS
Sequences:
>Translated_221_residues MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPAL LISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYALGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFF IAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINALQAS >Mature_221_residues MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPAL LISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYALGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFF IAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINALQAS
Specific function: Unknown
COG id: COG1738
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0862 [H]
Homologues:
Organism=Escherichia coli, GI1789882, Length=221, Percent_Identity=99.5475113122172, Blast_Score=442, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003744 [H]
Pfam domain/function: PF02592 DUF165 [H]
EC number: NA
Molecular weight: Translated: 25303; Mature: 25303
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHH RIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIAL HHHHHHHHHHHHHHHCCCEEECCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINALQAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC >Mature Secondary Structure MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHH RIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIAL HHHHHHHHHHHHHHHCCCEEECCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINALQAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]