| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209398275
Identifier: 209398275
GI number: 209398275
Start: 609541
End: 610557
Strand: Reverse
Name: 209398275
Synonym: ECH74115_0589
Alternate gene names: NA
Gene position: 610557-609541 (Counterclockwise)
Preceding gene: 209398992
Following gene: 209400226
Centisome position: 10.96
GC content: 48.57
Gene sequence:
>1017_bases ATGAAAACTGTAAACGTAGCTTTACTGGCACTCATAATTTCAGCAACATCCAGCCCTGTTGTTTTAGCTGGTGATACCAT TGAAGCGGCGGCAACAGAGCTTTCAGCCATTAACTCTGGCATGTCGCAATCGGAGATTGAGCAGAAGATTACCCGCTTTT TAGAACGCACAGACAACAGCCCCGCTGCGTATACCTATTTGACTGAACATCACTACATCCCTTCTGAAACACCTGATACC ACTCAGACTCCCACTGTCCAGACAGATCCTGACGCAGGACAAAAAACCGTTGCCGCTACAGGTGATGTACAGACAACTGC CCGTTATCAGAGCATGATCAACGCCCGACAGTCTGCGGTAACTGACGCCCAGCAAACGCAAATTACAGAGCAACAGGCGC AGATCGTAGCCACACAAAAAACGCTCGCCGCGACTGGAGATACGCAAAATACCGCGCATTATCAGGAAATGATTAATGCC AGACTGGCGGCTCAAAATGAGGCTAATCAGCGCACCGCCACTGAACAAGGGCAGAAAATGAATGCGCTGACAACCGATGT GGCAGTACAACAGCAAAATGAAAGGACTCAATACGATAAACAAATGCAAAGTCTGGCGCAGGAGTCTGCCCAGGCACATG AACAAATTGACAGCCTGTCACAAGACGTAACCCAAACGCACCAACAGTTAACCAACACCCAAAAACGGGTTGCAGATAAC AGCCAGCAAATTAACACGCTCAATAACCATTTCAGTTCGCTAAAAAACGAAGTTGATGACAATCGTAAAGAAGCCAATGC GGGAACTGCATCTGCCATCGCTATCGCCTCACAACCACAGGTTAAAACCGGTGACGTGATGATGGTGTCAGCGGGAGCGG GAACCTTCAACGGTGAATCTGCGGTGTCTGTCGGAACATCATTTAATGCCGGAACGCATACGGTACTTAAAGCCGGTATT TCTGCGGATACACAATCTGATTTCGGCGCAGGTGTCGGCGTGGGATATTCGTTCTAA
Upstream 100 bases:
>100_bases TAGATTTCGATTAAATTGCAACGCAGTTTATTTCTTAAAACAATATTATTTGTTTCTTATAGAAACATTAATACGACTTA TTTTGAACAAGAGAAAATGA
Downstream 100 bases:
>100_bases TATTTCAATCCTCAATATAAATAAGAGCAAGGAAGCTTGCCGGGTTCACCTCTTCATTAATTTGTACATTATTTAAGGTT AACAATGATGAATAGCTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: YadA Domain-Containing Protein
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MKTVNVALLALIISATSSPVVLAGDTIEAAATELSAINSGMSQSEIEQKITRFLERTDNSPAAYTYLTEHHYIPSETPDT TQTPTVQTDPDAGQKTVAATGDVQTTARYQSMINARQSAVTDAQQTQITEQQAQIVATQKTLAATGDTQNTAHYQEMINA RLAAQNEANQRTATEQGQKMNALTTDVAVQQQNERTQYDKQMQSLAQESAQAHEQIDSLSQDVTQTHQQLTNTQKRVADN SQQINTLNNHFSSLKNEVDDNRKEANAGTASAIAIASQPQVKTGDVMMVSAGAGTFNGESAVSVGTSFNAGTHTVLKAGI SADTQSDFGAGVGVGYSF
Sequences:
>Translated_338_residues MKTVNVALLALIISATSSPVVLAGDTIEAAATELSAINSGMSQSEIEQKITRFLERTDNSPAAYTYLTEHHYIPSETPDT TQTPTVQTDPDAGQKTVAATGDVQTTARYQSMINARQSAVTDAQQTQITEQQAQIVATQKTLAATGDTQNTAHYQEMINA RLAAQNEANQRTATEQGQKMNALTTDVAVQQQNERTQYDKQMQSLAQESAQAHEQIDSLSQDVTQTHQQLTNTQKRVADN SQQINTLNNHFSSLKNEVDDNRKEANAGTASAIAIASQPQVKTGDVMMVSAGAGTFNGESAVSVGTSFNAGTHTVLKAGI SADTQSDFGAGVGVGYSF >Mature_338_residues MKTVNVALLALIISATSSPVVLAGDTIEAAATELSAINSGMSQSEIEQKITRFLERTDNSPAAYTYLTEHHYIPSETPDT TQTPTVQTDPDAGQKTVAATGDVQTTARYQSMINARQSAVTDAQQTQITEQQAQIVATQKTLAATGDTQNTAHYQEMINA RLAAQNEANQRTATEQGQKMNALTTDVAVQQQNERTQYDKQMQSLAQESAQAHEQIDSLSQDVTQTHQQLTNTQKRVADN SQQINTLNNHFSSLKNEVDDNRKEANAGTASAIAIASQPQVKTGDVMMVSAGAGTFNGESAVSVGTSFNAGTHTVLKAGI SADTQSDFGAGVGVGYSF
Specific function: Unknown
COG id: COG5295
COG function: function code UW; Autotransporter adhesin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36020; Mature: 36020
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVNVALLALIISATSSPVVLAGDTIEAAATELSAINSGMSQSEIEQKITRFLERTDNS CCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC PAAYTYLTEHHYIPSETPDTTQTPTVQTDPDAGQKTVAATGDVQTTARYQSMINARQSAV CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH TDAQQTQITEQQAQIVATQKTLAATGDTQNTAHYQEMINARLAAQNEANQRTATEQGQKM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH NALTTDVAVQQQNERTQYDKQMQSLAQESAQAHEQIDSLSQDVTQTHQQLTNTQKRVADN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SQQINTLNNHFSSLKNEVDDNRKEANAGTASAIAIASQPQVKTGDVMMVSAGAGTFNGES HHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCC AVSVGTSFNAGTHTVLKAGISADTQSDFGAGVGVGYSF CEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKTVNVALLALIISATSSPVVLAGDTIEAAATELSAINSGMSQSEIEQKITRFLERTDNS CCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC PAAYTYLTEHHYIPSETPDTTQTPTVQTDPDAGQKTVAATGDVQTTARYQSMINARQSAV CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH TDAQQTQITEQQAQIVATQKTLAATGDTQNTAHYQEMINARLAAQNEANQRTATEQGQKM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH NALTTDVAVQQQNERTQYDKQMQSLAQESAQAHEQIDSLSQDVTQTHQQLTNTQKRVADN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SQQINTLNNHFSSLKNEVDDNRKEANAGTASAIAIASQPQVKTGDVMMVSAGAGTFNGES HHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCC AVSVGTSFNAGTHTVLKAGISADTQSDFGAGVGVGYSF CEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA