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The map label for this gene is bepC [H]

Identifier: 209398272

GI number: 209398272

Start: 583481

End: 584836

Strand: Direct

Name: bepC [H]

Synonym: ECH74115_0580

Alternate gene names: 209398272

Gene position: 583481-584836 (Clockwise)

Preceding gene: 209397350

Following gene: 209395885

Centisome position: 10.47

GC content: 51.47

Gene sequence:

>1356_bases
ATGGCGCGATTCCAGTTTAAAAACCGTAAAAATAATGGACTTATTTTTTTTATAAGTTTTATGGTGATGGGAGAAGCTGC
AATTGCTGCACCGCTGCCACAATGGGCGAATGCCCCAGCGGTAACGCCAGTTGCCCAATTATCTTTACAGGAAAGTATAT
TACGCGCCTTTGCGCGAAATCCCGGTGTCACTCAACAGGCGGCGCAGATAGGTATTGGCGAAGCGCAAATTGATGAAGCC
AAAAGTGCCTGGTATCCGCACGTTGGATTAACCGGCAACGCGGGGCCGTCCCGACAAACGGACTCCAGCGGCAGGCTTGA
TAACAACGTTTCGTATGGCATAACCCTGACACAACTGGTGTATGACTTTGGTAAAACTAACAACGATATCAATCTGCAAA
CTGCCGCCCGTGACAGCTACCGCTTTAAATTGATGGCAACCTTAACCGATGTTGCAGAGAAAACGGCGACTGCCTACATG
GAAGTTAGTCGTTATCAGGCTTTGTGCGATGCGGCTCAACGCAATATTCACTCGCTGGAAAACGTCTACAACATGGCGGC
ATTGCGCGCTAACGCAGGCCTGAACTCATCGTCGGATGAATTACAGGCCCAGACGCGTATTGCCGGAATGCGCTCAACGC
TGGAGCAATATCAGGCGCAGATGGCGAGCGCCAAAGCGCAACTGGCGGTGCTCACTGGCGTACAGCCGGAGGCGATAGCC
GCGCCACCTGCTGAATTAGCCGAGCAGCCGGTATCGCTGAAGAATATTGATTACCAGTCCATCCCGCTGGTGCTGGCGGC
AGAAAACTTACGCCAGTCAGCACAGTACGGCGTGGAAAAAACGAAAGCGCAATACTGGCCAACGCTCAGTATTCAGGGGG
GTAAAACGCGCTACCAGACCAGCGACCGCTCGTATTGGGATGATCAGCTACAACTGAACGTTAACGCGCCGCTGTATCAG
GGCGGCGCGGTTTCTGCCCAGGTGCAACAGGCCGAAGGGCAACAAAAAATCTCTGCCTCGCAGGTCGAACAGGCAAAACT
GGATGTGCTGCAACGAGCGTCTGTGGCATATGCGAACTGGACCGGCGCACGGGGTCGTGAAGAAGCCGGTTTAGCGCAAT
CCGAAAGTGCGCACAAAACGCGAGATGTGTACCAAAATGAATATAAATTGGGTAAACGCAGTCTGAATGATCTATTAACC
GTCGAACAAGATGTCTTTCAGGCGCAATCGGCTGAAATAAATGCCAATTATGATGGCTGGGTCGCCGCCGTAAATTATGC
CGCTGCGGTGAATAACCTTATTCCATTAGCGGGAATTAAACAGGGCTTATACAACGACTTACCCGACTTGAAATAA

Upstream 100 bases:

>100_bases
GATCGACAAAAGAGATGCACAAGTTATTACCCTTCTTAATAAAACGAGACTGGTTATAAAAACCAGTTAAAATAATGACC
TGGAAGGAAGTGACTTATCT

Downstream 100 bases:

>100_bases
TCCTGCCATTATTAATAGTGGGCCGTTGTTAAGTGATTACCTTTGTCTTATTTAGATAAATGGACTCGCTAAGGATGTGC
GCCATTTATCAGGAATGCCA

Product: putative outer membrane transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MARFQFKNRKNNGLIFFISFMVMGEAAIAAPLPQWANAPAVTPVAQLSLQESILRAFARNPGVTQQAAQIGIGEAQIDEA
KSAWYPHVGLTGNAGPSRQTDSSGRLDNNVSYGITLTQLVYDFGKTNNDINLQTAARDSYRFKLMATLTDVAEKTATAYM
EVSRYQALCDAAQRNIHSLENVYNMAALRANAGLNSSSDELQAQTRIAGMRSTLEQYQAQMASAKAQLAVLTGVQPEAIA
APPAELAEQPVSLKNIDYQSIPLVLAAENLRQSAQYGVEKTKAQYWPTLSIQGGKTRYQTSDRSYWDDQLQLNVNAPLYQ
GGAVSAQVQQAEGQQKISASQVEQAKLDVLQRASVAYANWTGARGREEAGLAQSESAHKTRDVYQNEYKLGKRSLNDLLT
VEQDVFQAQSAEINANYDGWVAAVNYAAAVNNLIPLAGIKQGLYNDLPDLK

Sequences:

>Translated_451_residues
MARFQFKNRKNNGLIFFISFMVMGEAAIAAPLPQWANAPAVTPVAQLSLQESILRAFARNPGVTQQAAQIGIGEAQIDEA
KSAWYPHVGLTGNAGPSRQTDSSGRLDNNVSYGITLTQLVYDFGKTNNDINLQTAARDSYRFKLMATLTDVAEKTATAYM
EVSRYQALCDAAQRNIHSLENVYNMAALRANAGLNSSSDELQAQTRIAGMRSTLEQYQAQMASAKAQLAVLTGVQPEAIA
APPAELAEQPVSLKNIDYQSIPLVLAAENLRQSAQYGVEKTKAQYWPTLSIQGGKTRYQTSDRSYWDDQLQLNVNAPLYQ
GGAVSAQVQQAEGQQKISASQVEQAKLDVLQRASVAYANWTGARGREEAGLAQSESAHKTRDVYQNEYKLGKRSLNDLLT
VEQDVFQAQSAEINANYDGWVAAVNYAAAVNNLIPLAGIKQGLYNDLPDLK
>Mature_450_residues
ARFQFKNRKNNGLIFFISFMVMGEAAIAAPLPQWANAPAVTPVAQLSLQESILRAFARNPGVTQQAAQIGIGEAQIDEAK
SAWYPHVGLTGNAGPSRQTDSSGRLDNNVSYGITLTQLVYDFGKTNNDINLQTAARDSYRFKLMATLTDVAEKTATAYME
VSRYQALCDAAQRNIHSLENVYNMAALRANAGLNSSSDELQAQTRIAGMRSTLEQYQAQMASAKAQLAVLTGVQPEAIAA
PPAELAEQPVSLKNIDYQSIPLVLAAENLRQSAQYGVEKTKAQYWPTLSIQGGKTRYQTSDRSYWDDQLQLNVNAPLYQG
GAVSAQVQQAEGQQKISASQVEQAKLDVLQRASVAYANWTGARGREEAGLAQSESAHKTRDVYQNEYKLGKRSLNDLLTV
EQDVFQAQSAEINANYDGWVAAVNYAAAVNNLIPLAGIKQGLYNDLPDLK

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=396, Percent_Identity=25.2525252525253, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 49195; Mature: 49063

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARFQFKNRKNNGLIFFISFMVMGEAAIAAPLPQWANAPAVTPVAQLSLQESILRAFARN
CCCCCCCCCCCCCEEEEEHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PGVTQQAAQIGIGEAQIDEAKSAWYPHVGLTGNAGPSRQTDSSGRLDNNVSYGITLTQLV
CCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
YDFGKTNNDINLQTAARDSYRFKLMATLTDVAEKTATAYMEVSRYQALCDAAQRNIHSLE
HHHCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVYNMAALRANAGLNSSSDELQAQTRIAGMRSTLEQYQAQMASAKAQLAVLTGVQPEAIA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCC
APPAELAEQPVSLKNIDYQSIPLVLAAENLRQSAQYGVEKTKAQYWPTLSIQGGKTRYQT
CCCHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHCHHHHHHHHCCEEEECCCCCEEEC
SDRSYWDDQLQLNVNAPLYQGGAVSAQVQQAEGQQKISASQVEQAKLDVLQRASVAYANW
CCCCCCCCEEEEEECCCEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEECC
TGARGREEAGLAQSESAHKTRDVYQNEYKLGKRSLNDLLTVEQDVFQAQSAEINANYDGW
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
VAAVNYAAAVNNLIPLAGIKQGLYNDLPDLK
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ARFQFKNRKNNGLIFFISFMVMGEAAIAAPLPQWANAPAVTPVAQLSLQESILRAFARN
CCCCCCCCCCCCEEEEEHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PGVTQQAAQIGIGEAQIDEAKSAWYPHVGLTGNAGPSRQTDSSGRLDNNVSYGITLTQLV
CCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
YDFGKTNNDINLQTAARDSYRFKLMATLTDVAEKTATAYMEVSRYQALCDAAQRNIHSLE
HHHCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVYNMAALRANAGLNSSSDELQAQTRIAGMRSTLEQYQAQMASAKAQLAVLTGVQPEAIA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCC
APPAELAEQPVSLKNIDYQSIPLVLAAENLRQSAQYGVEKTKAQYWPTLSIQGGKTRYQT
CCCHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHCHHHHHHHHCCEEEECCCCCEEEC
SDRSYWDDQLQLNVNAPLYQGGAVSAQVQQAEGQQKISASQVEQAKLDVLQRASVAYANW
CCCCCCCCEEEEEECCCEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEECC
TGARGREEAGLAQSESAHKTRDVYQNEYKLGKRSLNDLLTVEQDVFQAQSAEINANYDGW
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
VAAVNYAAAVNNLIPLAGIKQGLYNDLPDLK
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]