| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209398174
Identifier: 209398174
GI number: 209398174
Start: 2117590
End: 2118165
Strand: Reverse
Name: 209398174
Synonym: ECH74115_2228
Alternate gene names: NA
Gene position: 2118165-2117590 (Counterclockwise)
Preceding gene: 209396259
Following gene: 209397346
Centisome position: 38.01
GC content: 42.88
Gene sequence:
>576_bases ATGCCGTTAACATCAGCTATTGCATCCAATTCATTTTCCACCGGAATGCAGGTTCTTCGTGCTCAAATGGCCGCCAGTGG CGGTGGAGAAATTACAGTAGGCGGGCAGACGGTCCGTATCACATATAGTGAAACGGATGGTCGCTTTCTGGCGAGTGGGG GCAATAACAGTTTGCTTTCTGGATTATTACTTACAGGGCTTAATGGTGGTCCTGAAGCGCTCAGGGATATAATGTTAAGA ATGGTTTCAGGTTCAGGTAACACACAATCACATGGTGATATTGAGGGGAAAATATCACAATGTAAGTTTTCTGTTAATAC GGAGAGCCTTCAGTGTCCATCCGAGGCGGTTCGATGCCCAATTATACTGGATAAACCAGAAGAAGGTGTGTTTGTTAAAA ATTCAGAAGGTTCTTTGGTTTGTACCTTATTTGATTCGGTTTCTTTTTCTCATTTGGTTCGCGACGGTGGGAAGCACCCG CTAACACGAGAACCAATAACGTCATCAATGATTGTAAGTCAAGAACAATGTATTTATGACCAAACCAAAGGAAACTTTGT CATAAAGGATAAGTGA
Upstream 100 bases:
>100_bases CAAAAACCGGAGTCCGGCTCCGGTTTTTGTTGTCATGTATGGGGGCTGTTTGTTATGACTCCCTGTGTTTGGAATGAATA TTTAAATAGGGAGTTTTGTC
Downstream 100 bases:
>100_bases AATAAATATTACCCAAGCTATATGTTAACTGCCAGTTGCTTATATGAAATGCTACAGATGTTCAGGGTATAAGGATGTGG TAATTGGTGTACTGGATGCA
Product: non-LEE-encoded effector NleG
Products: NA
Alternate protein names: T3SS Secreted Effector NleG-Like Protein; T3SS Effector; T3SS Secreted Effector NleI/NleG Homolog
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MPLTSAIASNSFSTGMQVLRAQMAASGGGEITVGGQTVRITYSETDGRFLASGGNNSLLSGLLLTGLNGGPEALRDIMLR MVSGSGNTQSHGDIEGKISQCKFSVNTESLQCPSEAVRCPIILDKPEEGVFVKNSEGSLVCTLFDSVSFSHLVRDGGKHP LTREPITSSMIVSQEQCIYDQTKGNFVIKDK
Sequences:
>Translated_191_residues MPLTSAIASNSFSTGMQVLRAQMAASGGGEITVGGQTVRITYSETDGRFLASGGNNSLLSGLLLTGLNGGPEALRDIMLR MVSGSGNTQSHGDIEGKISQCKFSVNTESLQCPSEAVRCPIILDKPEEGVFVKNSEGSLVCTLFDSVSFSHLVRDGGKHP LTREPITSSMIVSQEQCIYDQTKGNFVIKDK >Mature_190_residues PLTSAIASNSFSTGMQVLRAQMAASGGGEITVGGQTVRITYSETDGRFLASGGNNSLLSGLLLTGLNGGPEALRDIMLRM VSGSGNTQSHGDIEGKISQCKFSVNTESLQCPSEAVRCPIILDKPEEGVFVKNSEGSLVCTLFDSVSFSHLVRDGGKHPL TREPITSSMIVSQEQCIYDQTKGNFVIKDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20249; Mature: 20118
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTSAIASNSFSTGMQVLRAQMAASGGGEITVGGQTVRITYSETDGRFLASGGNNSLLS CCCCHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCEEEEEEEECCCCEEEECCCCCHHHH GLLLTGLNGGPEALRDIMLRMVSGSGNTQSHGDIEGKISQCKFSVNTESLQCPSEAVRCP HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHCCCC IILDKPEEGVFVKNSEGSLVCTLFDSVSFSHLVRDGGKHPLTREPITSSMIVSQEQCIYD EEEECCCCCEEEECCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCHHHHHCHHHHHEE QTKGNFVIKDK CCCCCEEEECC >Mature Secondary Structure PLTSAIASNSFSTGMQVLRAQMAASGGGEITVGGQTVRITYSETDGRFLASGGNNSLLS CCCHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCEEEEEEEECCCCEEEECCCCCHHHH GLLLTGLNGGPEALRDIMLRMVSGSGNTQSHGDIEGKISQCKFSVNTESLQCPSEAVRCP HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHCCCC IILDKPEEGVFVKNSEGSLVCTLFDSVSFSHLVRDGGKHPLTREPITSSMIVSQEQCIYD EEEECCCCCEEEECCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCHHHHHCHHHHHEE QTKGNFVIKDK CCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA