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The map label for this gene is stfR [H]

Identifier: 209398128

GI number: 209398128

Start: 926222

End: 927538

Strand: Direct

Name: stfR [H]

Synonym: ECH74115_0915

Alternate gene names: 209398128

Gene position: 926222-927538 (Clockwise)

Preceding gene: 209396045

Following gene: 209400364

Centisome position: 16.62

GC content: 59.15

Gene sequence:

>1317_bases
ATGGCAGCAGTACAAATATCAGGCGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACCATTCAACTGAAAGC
CAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGCCTCTGAAAATCCGGATGAGGCAGGGCGTTACAGCATGGACG
TCGAGTATGGTCAGTACAGCGTCACTCTGTTGGTGGAGGGATTCCCGCCATCACATGCCGGGACCATCACCGTGTATGAA
GATTCTCAACCGGGGACGCTGAATGATTTTCTCGGTGCCATGTCGGAGGATGACGTCCGGCCGGAGGCACTGCGTCGTTT
TGAACTGATGGTGGAAGAAGCGGCGCGTCACGCTGAGGAGGCGAAGAAGAATGCCGGAGAGGCGGAGACGTCCGCGAGGA
ATGCCGGCATATCAGCCAGTCAGGCAGAAGAGAGCGCGGCAAATGCTGACACTTCAGCAGGGGATGCATCGGAGTCAGCC
CGGCAGGCGGCAGAAAGTGCAGCCGCTGCAAAGCAGTCAGAGGAGGCGTCCTCGTCCTCGGCTTCTGCGGCCGCTCAAAA
AGCCAGTGAGTCATCACAAAGTGCAGCAGAAGCTGAATTGTCAAGAAAGACGGCAGAAAGTGCAGCCGGTAATGCAGCCA
GGGATGCAACGACCGCAACAGAAAAAGCCCGGGAATCAGCAGAAAGCGCACAGTCAGCGGAACAAAGCAGAATAGCGGCG
GAAGACGCCGTAAACAGAATTCCCACCGTGGTGGGGCCTCCCGGACCAAAGGGGGAACCGGGTCCCGCGGGTCCTCAGGG
GCCGAAGGGAGATAAAGGAGAGCGTGGAGACACCGGTCCGGCAGGGGCAACCGGTGAACGGGGACCGGGAGGAGATACAG
GTCCGGCAGGTCCGCAGGGGCCGAAAGGCGACAGGGGAGAGCGGGGAGAGACCGGTCTGACAGGAAGTACAGGTCCACAG
GGGCCAAAGGGAGATACCGGGGCAACAGGTCCGGCAGGACCGCAGGGACCGAAAGGGGAAACAGGTGCGGCTGGCCCGGT
GGGGGCTACCGGACCTCAGGGGGCGAAGGGCGACCCGGGGGAGACACAAATACGGTTCCGTCTGGGGCCGATGAGAATTA
TTGAGACAAACAGCTATGGCTGGTTCCCGGGTACAGATGGTGCGCTCATCACCGGACTGACCTTTCTTGACCCCAAAGAT
GCCACACAGGTTCAGGGGATGTTTCAGCATTTGCAGGTCAGATTTGGTGACGGGCCATGGCAGGATGTTAAGGGACTGGA
TGAAGTGGGCAGTGATACAGGCAGAACTGGAGAATGA

Upstream 100 bases:

>100_bases
GCACTGACGGTTTCATCGTGGGTGTCGGTTATAAATTTTGATTAGTAACACAGCGTTATGACAGCCCGCCGGTTCAGGCG
GGCTTTTTTGTGGAGTGGGT

Downstream 100 bases:

>100_bases
CATGAATATTTTGAGAAAGCTTATGCAGAGTCTGTGCGGTTGCGGAAAGCATGATGACTGTGAAAACGGACGGTCACTTA
CAGCACAATTGCGACTGGGA

Product: tail fiber protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MAAVQISGVLKDGAGKPIQNCTIQLKARRNSTTVVVNTVASENPDEAGRYSMDVEYGQYSVTLLVEGFPPSHAGTITVYE
DSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGDASESA
RQAAESAAAAKQSEEASSSSASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAA
EDAVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPGGDTGPAGPQGPKGDRGERGETGLTGSTGPQ
GPKGDTGATGPAGPQGPKGETGAAGPVGATGPQGAKGDPGETQIRFRLGPMRIIETNSYGWFPGTDGALITGLTFLDPKD
ATQVQGMFQHLQVRFGDGPWQDVKGLDEVGSDTGRTGE

Sequences:

>Translated_438_residues
MAAVQISGVLKDGAGKPIQNCTIQLKARRNSTTVVVNTVASENPDEAGRYSMDVEYGQYSVTLLVEGFPPSHAGTITVYE
DSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGDASESA
RQAAESAAAAKQSEEASSSSASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAA
EDAVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPGGDTGPAGPQGPKGDRGERGETGLTGSTGPQ
GPKGDTGATGPAGPQGPKGETGAAGPVGATGPQGAKGDPGETQIRFRLGPMRIIETNSYGWFPGTDGALITGLTFLDPKD
ATQVQGMFQHLQVRFGDGPWQDVKGLDEVGSDTGRTGE
>Mature_437_residues
AAVQISGVLKDGAGKPIQNCTIQLKARRNSTTVVVNTVASENPDEAGRYSMDVEYGQYSVTLLVEGFPPSHAGTITVYED
SQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGDASESAR
QAAESAAAAKQSEEASSSSASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAE
DAVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPGGDTGPAGPQGPKGDRGERGETGLTGSTGPQG
PKGDTGATGPAGPQGPKGETGAAGPVGATGPQGAKGDPGETQIRFRLGPMRIIETNSYGWFPGTDGALITGLTFLDPKDA
TQVQGMFQHLQVRFGDGPWQDVKGLDEVGSDTGRTGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tail fiber family [H]

Homologues:

Organism=Homo sapiens, GI65301115, Length=103, Percent_Identity=51.4563106796116, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI56847616, Length=103, Percent_Identity=51.4563106796116, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI5803080, Length=110, Percent_Identity=50, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI55743098, Length=112, Percent_Identity=47.3214285714286, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI55743106, Length=112, Percent_Identity=47.3214285714286, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI240255535, Length=112, Percent_Identity=47.3214285714286, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI115392133, Length=126, Percent_Identity=49.2063492063492, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI183583553, Length=111, Percent_Identity=43.2432432432432, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI48762934, Length=131, Percent_Identity=45.0381679389313, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI115527062, Length=107, Percent_Identity=46.7289719626168, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI115527066, Length=100, Percent_Identity=49, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI89363017, Length=128, Percent_Identity=46.875, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI115527070, Length=100, Percent_Identity=49, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI156616290, Length=143, Percent_Identity=38.4615384615385, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI87196339, Length=164, Percent_Identity=36.5853658536585, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI87081892, Length=122, Percent_Identity=87.7049180327869, Blast_Score=238, Evalue=8e-64,
Organism=Caenorhabditis elegans, GI17569903, Length=132, Percent_Identity=46.2121212121212, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17535735, Length=110, Percent_Identity=48.1818181818182, Blast_Score=68, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17551704, Length=191, Percent_Identity=34.5549738219895, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008969
- InterPro:   IPR014766
- InterPro:   IPR011083
- InterPro:   IPR005003
- InterPro:   IPR013609 [H]

Pfam domain/function: PF07484 Collar; PF03335 Phage_fiber; PF08400 phage_tail_N [H]

EC number: NA

Molecular weight: Translated: 44303; Mature: 44172

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVQISGVLKDGAGKPIQNCTIQLKARRNSTTVVVNTVASENPDEAGRYSMDVEYGQYS
CCEEEEEHHHHCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCEEE
VTLLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEE
EEEEEECCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AKKNAGEAETSARNAGISASQAEESAANADTSAGDASESARQAAESAAAAKQSEEASSSS
HHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH
ASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDAVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPGGDTGPAGPQG
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PKGDRGERGETGLTGSTGPQGPKGDTGATGPAGPQGPKGETGAAGPVGATGPQGAKGDPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ETQIRFRLGPMRIIETNSYGWFPGTDGALITGLTFLDPKDATQVQGMFQHLQVRFGDGPW
CEEEEEEECCEEEEEECCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHEEEECCCCC
QDVKGLDEVGSDTGRTGE
HHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AAVQISGVLKDGAGKPIQNCTIQLKARRNSTTVVVNTVASENPDEAGRYSMDVEYGQYS
CEEEEEHHHHCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCEEE
VTLLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEE
EEEEEECCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AKKNAGEAETSARNAGISASQAEESAANADTSAGDASESARQAAESAAAAKQSEEASSSS
HHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH
ASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDAVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPGGDTGPAGPQG
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PKGDRGERGETGLTGSTGPQGPKGDTGATGPAGPQGPKGETGAAGPVGATGPQGAKGDPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ETQIRFRLGPMRIIETNSYGWFPGTDGALITGLTFLDPKDATQVQGMFQHLQVRFGDGPW
CEEEEEEECCEEEEEECCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHEEEECCCCC
QDVKGLDEVGSDTGRTGE
HHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]