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The map label for this gene is ybaE [H]

Identifier: 209398118

GI number: 209398118

Start: 535262

End: 536962

Strand: Reverse

Name: ybaE [H]

Synonym: ECH74115_0531

Alternate gene names: 209398118

Gene position: 536962-535262 (Counterclockwise)

Preceding gene: 209396755

Following gene: 209396500

Centisome position: 9.64

GC content: 53.15

Gene sequence:

>1701_bases
ATGCGACTGCTCAACCGCCTTAACCAGTATCAACGTCTGTGGCAACCTTCCGCCGGAAAGCCGCAAACCGTCACCGTCAG
CGAACTGGCCGAACGCTGTTTTTGCAGCGAACGCCATGTTCGTACGCTGTTGCGTCAGGCACAGGAAGCGGGATGGCTGG
AGTGGCAGGCGCAGTCAGGACGCGGAAAGCGCGGACAATTACGCTTTCTGGTCACGCCAGAATCGCTACGCAATGCGATG
ATGGAAAAGGCACTGGAAACCGGAAAGCAGCAAGATGTGCTGGAGCTGGCGCAACTGGCCCCAGGTGAGCTGCGCACTCT
GTTACAGCCGTTTATGGGCGGACAATGGCAAAACGATACACCCACGTTGCGTATTCCCTACTATCGCCCGCTCGAACCGC
TACAACCGGGCTTTTTGCCCGGCCGTGCCGAGCAGCATCTCGCCGGACAGATATTTTCCGGCCTGACCCGCTTCGATAAT
AATACCCAGCGCCCGATTGGCGATTTAGCGCATCACTGGGAAACCTCTGCTGACGGGTTACGCTGGGACTTTTATCTTCG
TTCAACCCTACACTGGCATAACGGCGATGCAGTAAAAGCCTCACACTTACACCAGCGATTATTGATGCTGTTACAACTGC
CAGCACTGGATCAATTATTTATTAGCGTGAAGCGTATTGAGGTCACCCATCCGCAGTGTCTGACCTTCTTTTTACATCGC
CCCGATTACTGGCTTGCGCACCGGCTGGCGAGCTATTGCAGCCATCTGGCGCATCCGCAATTCCCACTGATTGGCACGGG
TCCTTTTCGCTTAACACAATTCACAGCTGAACTGGTGCGCCTGGAAAGCCATGATTATTACCATTTACGTCATCCGCTGC
TTAAAGCGGTTGAGTACTGGATAACTCCGCCGCTTTTCGAAAAAGATTTGGGAACCAGTTGTCGGCATCCCGTGCAAATC
ACCATCGGCAAACCGGAGGAGCTGCAACGGGTCAGCCAGGTCAGTAGTGGCATCAGTTTAGGTTTTTGCTATTTAACGTT
GCGCAAAAGTCCCCGACTCTCCCTCTGGCAGGCGCGAAAAGTGATCTCCATTATTCATCAATCCGGTTTATTACAAACGT
TAGAAGTCGGAGAAAACCTGATCACCGCCAGTCATGCATTACTGCCAGGCTGGACTATTCCGCATTGGCAAGTACCGGAT
GAAGTCAAACTACCGAAAACCTTGACGCTGGTTTATCACCTCCCGATAGAACTTCATACCATGGCAGAACGCCTACAGGC
GACACTGGCAGCGGAAGGCTGTGAACTCACAATTATTTTTCATAACGCAAAAAACTGGGACGACACGACCCTACTGGCAC
ACGCAGACCTCATGATGGGCGACAGATTAATTGGCGAAGCACCGGAATATACTCTGGAGCAATGGCTGCGCTGCGATCCG
CTGTGGCCACATGTTTTCGACGCTCCAGCATACGCACATCTACAATCGACACTGGACGCGGTGCAAGTAATGCCTGATGA
GGAAAACCGATTTAATGCCCTGAAAGCGGTTTTTAGCCAGTTAATGACAGATGCGACGCTGACGCCGCTGTTCAACTATC
ACTATCGCATTAGTGCCCCTCCCGGCGTGAACGGTGTGCGACTGACACCGCGCGGCTGGTTTGAATTTACCGAAGCCTGG
CTTCCCGCGCCGTCGCAATGA

Upstream 100 bases:

>100_bases
TTTCTTTCTCCACTCTGTGACACGGTTAATGGTGATTGAGTATCACCTGATATATACGGAAGTAATAGTGAATAGTTAAA
TAATATTGTTCCGGGTTTTT

Downstream 100 bases:

>100_bases
ATAGCTGGTCCGGGTTAATCGCAGGCGTTACCATAACGCTTTTATTGTTCAAGCAGGATTATCTATGAAACGTGCTGTCG
TTGTGTTCAGTGGAGGCCAG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEAGWLEWQAQSGRGKRGQLRFLVTPESLRNAM
MEKALETGKQQDVLELAQLAPGELRTLLQPFMGGQWQNDTPTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDN
NTQRPIGDLAHHWETSADGLRWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQLFISVKRIEVTHPQCLTFFLHR
PDYWLAHRLASYCSHLAHPQFPLIGTGPFRLTQFTAELVRLESHDYYHLRHPLLKAVEYWITPPLFEKDLGTSCRHPVQI
TIGKPEELQRVSQVSSGISLGFCYLTLRKSPRLSLWQARKVISIIHQSGLLQTLEVGENLITASHALLPGWTIPHWQVPD
EVKLPKTLTLVYHLPIELHTMAERLQATLAAEGCELTIIFHNAKNWDDTTLLAHADLMMGDRLIGEAPEYTLEQWLRCDP
LWPHVFDAPAYAHLQSTLDAVQVMPDEENRFNALKAVFSQLMTDATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFTEAW
LPAPSQ

Sequences:

>Translated_566_residues
MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEAGWLEWQAQSGRGKRGQLRFLVTPESLRNAM
MEKALETGKQQDVLELAQLAPGELRTLLQPFMGGQWQNDTPTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDN
NTQRPIGDLAHHWETSADGLRWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQLFISVKRIEVTHPQCLTFFLHR
PDYWLAHRLASYCSHLAHPQFPLIGTGPFRLTQFTAELVRLESHDYYHLRHPLLKAVEYWITPPLFEKDLGTSCRHPVQI
TIGKPEELQRVSQVSSGISLGFCYLTLRKSPRLSLWQARKVISIIHQSGLLQTLEVGENLITASHALLPGWTIPHWQVPD
EVKLPKTLTLVYHLPIELHTMAERLQATLAAEGCELTIIFHNAKNWDDTTLLAHADLMMGDRLIGEAPEYTLEQWLRCDP
LWPHVFDAPAYAHLQSTLDAVQVMPDEENRFNALKAVFSQLMTDATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFTEAW
LPAPSQ
>Mature_566_residues
MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEAGWLEWQAQSGRGKRGQLRFLVTPESLRNAM
MEKALETGKQQDVLELAQLAPGELRTLLQPFMGGQWQNDTPTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDN
NTQRPIGDLAHHWETSADGLRWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQLFISVKRIEVTHPQCLTFFLHR
PDYWLAHRLASYCSHLAHPQFPLIGTGPFRLTQFTAELVRLESHDYYHLRHPLLKAVEYWITPPLFEKDLGTSCRHPVQI
TIGKPEELQRVSQVSSGISLGFCYLTLRKSPRLSLWQARKVISIIHQSGLLQTLEVGENLITASHALLPGWTIPHWQVPD
EVKLPKTLTLVYHLPIELHTMAERLQATLAAEGCELTIIFHNAKNWDDTTLLAHADLMMGDRLIGEAPEYTLEQWLRCDP
LWPHVFDAPAYAHLQSTLDAVQVMPDEENRFNALKAVFSQLMTDATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFTEAW
LPAPSQ

Specific function: Unknown

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786650, Length=566, Percent_Identity=99.2932862190813, Blast_Score=1157, Evalue=0.0,
Organism=Escherichia coli, GI1786256, Length=583, Percent_Identity=28.1303602058319, Blast_Score=181, Evalue=9e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 64933; Mature: 64933

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEAGWLEWQAQSG
CHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCC
RGKRGQLRFLVTPESLRNAMMEKALETGKQQDVLELAQLAPGELRTLLQPFMGGQWQNDT
CCCCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
PTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDNNTQRPIGDLAHHWETSADGL
CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCC
RWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQLFISVKRIEVTHPQCLTFFLHR
EEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCHHHHHHHHCC
PDYWLAHRLASYCSHLAHPQFPLIGTGPFRLTQFTAELVRLESHDYYHLRHPLLKAVEYW
CCHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQVSSGISLGFCYLTLRKSPRLSLWQARK
CCCCCHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHH
VISIIHQSGLLQTLEVGENLITASHALLPGWTIPHWQVPDEVKLPKTLTLVYHLPIELHT
HHHHHHHHCCHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHH
MAERLQATLAAEGCELTIIFHNAKNWDDTTLLAHADLMMGDRLIGEAPEYTLEQWLRCDP
HHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEHHHHHHCCHHHCCCCHHHHHHHHCCCC
LWPHVFDAPAYAHLQSTLDAVQVMPDEENRFNALKAVFSQLMTDATLTPLFNYHYRISAP
CCCCHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCEEEECC
PGVNGVRLTPRGWFEFTEAWLPAPSQ
CCCCCEEECCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEAGWLEWQAQSG
CHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCC
RGKRGQLRFLVTPESLRNAMMEKALETGKQQDVLELAQLAPGELRTLLQPFMGGQWQNDT
CCCCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
PTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDNNTQRPIGDLAHHWETSADGL
CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCC
RWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQLFISVKRIEVTHPQCLTFFLHR
EEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCHHHHHHHHCC
PDYWLAHRLASYCSHLAHPQFPLIGTGPFRLTQFTAELVRLESHDYYHLRHPLLKAVEYW
CCHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQVSSGISLGFCYLTLRKSPRLSLWQARK
CCCCCHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHH
VISIIHQSGLLQTLEVGENLITASHALLPGWTIPHWQVPDEVKLPKTLTLVYHLPIELHT
HHHHHHHHCCHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHH
MAERLQATLAAEGCELTIIFHNAKNWDDTTLLAHADLMMGDRLIGEAPEYTLEQWLRCDP
HHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEHHHHHHCCHHHCCCCHHHHHHHHCCCC
LWPHVFDAPAYAHLQSTLDAVQVMPDEENRFNALKAVFSQLMTDATLTPLFNYHYRISAP
CCCCHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCEEEECC
PGVNGVRLTPRGWFEFTEAWLPAPSQ
CCCCCEEECCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]