| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is yqeG
Identifier: 209398062
GI number: 209398062
Start: 3812645
End: 3813874
Strand: Direct
Name: yqeG
Synonym: ECH74115_4114
Alternate gene names: 209398062
Gene position: 3812645-3813874 (Clockwise)
Preceding gene: 209399771
Following gene: 209395725
Centisome position: 68.42
GC content: 44.39
Gene sequence:
>1230_bases ATGTCTAATATTTGGTCTAAAGAAGAAACTCTGTGGAGTTTCGCGCTCTACGGCACAGCCGTTGGTGCAGGCACGCTCTT CCTTCCTATTCAGTTAGGTTCGGCAGGGGCTGTGGTCCTGTTTATTACTGCTCTGGTCGCCTGGCCTTTAACATACTGGC CACATAAAGCTTTATGCCAGTTCATCCTCTCATCGAAAACATCAGCAGGTGAAGGGATAACGGGCGCGGTAACACACTAC TATGGCAAGAAGATTGGTAATCTGATTACCACGCTGTACTTCATCGCCTTTTTTGTCGTCGTGTTGATATATGCAGTGGC AATTACCAACTCACTTACGGAACAGCTGGCAAAGCATATGGTTATTGATCTTCGCATCCGTATGTTGGTGAGTCTGGGTG TTGTATTAATTCTGAATCTCATTTTTCTGATGGGACGTCATGCCACTATTCGGGTAATGGGATTTTTGGTATTCCCATTG ATTGCCTATTTCTTATTTCTTTCCATTTACCTTGTAGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGAGTTCAA TCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGCCCATTATTTCTACGT TTGCCATAGACAGACGTGAAAAATATGGCGAACACGCTATGGATAAATGCAAAAAAATTATGAAAGTCGCTTATCTCATC ATCTGCATAAGTGTACTGTTCTTTGTCTTTAGCTGCCTGCTTTCTATTCCACCTTCGTATATTGAAGCGGCTAAAGAAGA AGGGGTCACCATTTTATCGGCGCTTTCTATGCTGCCGAACGCCCCAGCATGGTTGTCAATTTCCGGGATTATTGTCGCAG TAGTTGCGATGTCGAAATCATTCCTGGGTACGTACTTTGGCGTTATTGAAGGTGCCACGGAGGTCGTCAAAACAACACTA CAGCAGGTTGGTGTAAAGAAAAGTCGTGCATTTAACCGCGCACTATCAATTATGTTGGTATCGCTGATTACCTTCATTGT TTGTTGCATTAACCCGAACGCGATTTCGATGATTTATGCGATCAGCGGCCCGCTCATTGCCATGATACTTTTCATCATGC CTACGCTATCAACATATCTCATCCCGGCGCTTAAACCCTGGCGCTCCATCGGAAATCTGATTACGCTGATCGTGGGTATC CTGTGCGTATCGGTAATGTTCTTTAGCTAA
Upstream 100 bases:
>100_bases CCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTTTGTTTAATTT GTAGATGATACGTTCAGATA
Downstream 100 bases:
>100_bases TATCCATTGTGAATGGTTCAAAATTGCTACAATTTTGAACCATTCCAGTTTTCATAATGTGCATTTGTTATTATTCCGCT CTATCACTTCTCTCGTCATA
Product: serine transporter family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MSNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITALVAWPLTYWPHKALCQFILSSKTSAGEGITGAVTHY YGKKIGNLITTLYFIAFFVVVLIYAVAITNSLTEQLAKHMVIDLRIRMLVSLGVVLILNLIFLMGRHATIRVMGFLVFPL IAYFLFLSIYLVGSWQPDLLTTQVEFNQNTLHQIWISIPVMVFAFSHTPIISTFAIDRREKYGEHAMDKCKKIMKVAYLI ICISVLFFVFSCLLSIPPSYIEAAKEEGVTILSALSMLPNAPAWLSISGIIVAVVAMSKSFLGTYFGVIEGATEVVKTTL QQVGVKKSRAFNRALSIMLVSLITFIVCCINPNAISMIYAISGPLIAMILFIMPTLSTYLIPALKPWRSIGNLITLIVGI LCVSVMFFS
Sequences:
>Translated_409_residues MSNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITALVAWPLTYWPHKALCQFILSSKTSAGEGITGAVTHY YGKKIGNLITTLYFIAFFVVVLIYAVAITNSLTEQLAKHMVIDLRIRMLVSLGVVLILNLIFLMGRHATIRVMGFLVFPL IAYFLFLSIYLVGSWQPDLLTTQVEFNQNTLHQIWISIPVMVFAFSHTPIISTFAIDRREKYGEHAMDKCKKIMKVAYLI ICISVLFFVFSCLLSIPPSYIEAAKEEGVTILSALSMLPNAPAWLSISGIIVAVVAMSKSFLGTYFGVIEGATEVVKTTL QQVGVKKSRAFNRALSIMLVSLITFIVCCINPNAISMIYAISGPLIAMILFIMPTLSTYLIPALKPWRSIGNLITLIVGI LCVSVMFFS >Mature_408_residues SNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITALVAWPLTYWPHKALCQFILSSKTSAGEGITGAVTHYY GKKIGNLITTLYFIAFFVVVLIYAVAITNSLTEQLAKHMVIDLRIRMLVSLGVVLILNLIFLMGRHATIRVMGFLVFPLI AYFLFLSIYLVGSWQPDLLTTQVEFNQNTLHQIWISIPVMVFAFSHTPIISTFAIDRREKYGEHAMDKCKKIMKVAYLII CISVLFFVFSCLLSIPPSYIEAAKEEGVTILSALSMLPNAPAWLSISGIIVAVVAMSKSFLGTYFGVIEGATEVVKTTLQ QVGVKKSRAFNRALSIMLVSLITFIVCCINPNAISMIYAISGPLIAMILFIMPTLSTYLIPALKPWRSIGNLITLIVGIL CVSVMFFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily
Homologues:
Organism=Escherichia coli, GI1789211, Length=409, Percent_Identity=100, Blast_Score=820, Evalue=0.0, Organism=Escherichia coli, GI1789160, Length=413, Percent_Identity=38.498789346247, Blast_Score=286, Evalue=1e-78, Organism=Escherichia coli, GI1789504, Length=420, Percent_Identity=30.952380952381, Blast_Score=200, Evalue=1e-52, Organism=Escherichia coli, GI145693183, Length=412, Percent_Identity=22.5728155339806, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1789961, Length=404, Percent_Identity=21.039603960396, Blast_Score=77, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YQEG_ECO57 (P63342)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: A85937 - PIR: F91091 - RefSeq: NP_289398.1 - RefSeq: NP_311729.1 - ProteinModelPortal: P63342 - EnsemblBacteria: EBESCT00000024331 - EnsemblBacteria: EBESCT00000059865 - GeneID: 916486 - GeneID: 958315 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z4165 - KEGG: ecs:ECs3702 - GeneTree: EBGT00050000008986 - HOGENOM: HBG296888 - OMA: AMGKCKK - ProtClustDB: CLSK880505 - BioCyc: ECOL83334:ECS3702-MONOMER - InterPro: IPR004694 - InterPro: IPR018227 - TIGRFAMs: TIGR00814
Pfam domain/function: PF03222 Trp_Tyr_perm
EC number: NA
Molecular weight: Translated: 45100; Mature: 44969
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x108484fc)-; HASH(0x1124ac54)-; HASH(0x113f152c)-; HASH(0x10337b94)-; HASH(0x10e9b82c)-; HASH(0xffc7bb4)-; HASH(0x113ebc84)-; HASH(0x10f6b67c)-; HASH(0x10b498a4)-; HASH(0x1148cb94)-;
Cys/Met content:
1.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITALVAWPLTYWPHKALCQ CCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHH FILSSKTSAGEGITGAVTHYYGKKIGNLITTLYFIAFFVVVLIYAVAITNSLTEQLAKHM HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIDLRIRMLVSLGVVLILNLIFLMGRHATIRVMGFLVFPLIAYFLFLSIYLVGSWQPDLL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE TTQVEFNQNTLHQIWISIPVMVFAFSHTPIISTFAIDRREKYGEHAMDKCKKIMKVAYLI EEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ICISVLFFVFSCLLSIPPSYIEAAKEEGVTILSALSMLPNAPAWLSISGIIVAVVAMSKS HHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHH FLGTYFGVIEGATEVVKTTLQQVGVKKSRAFNRALSIMLVSLITFIVCCINPNAISMIYA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ISGPLIAMILFIMPTLSTYLIPALKPWRSIGNLITLIVGILCVSVMFFS HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure SNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITALVAWPLTYWPHKALCQ CCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHH FILSSKTSAGEGITGAVTHYYGKKIGNLITTLYFIAFFVVVLIYAVAITNSLTEQLAKHM HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIDLRIRMLVSLGVVLILNLIFLMGRHATIRVMGFLVFPLIAYFLFLSIYLVGSWQPDLL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE TTQVEFNQNTLHQIWISIPVMVFAFSHTPIISTFAIDRREKYGEHAMDKCKKIMKVAYLI EEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ICISVLFFVFSCLLSIPPSYIEAAKEEGVTILSALSMLPNAPAWLSISGIIVAVVAMSKS HHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHH FLGTYFGVIEGATEVVKTTLQQVGVKKSRAFNRALSIMLVSLITFIVCCINPNAISMIYA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ISGPLIAMILFIMPTLSTYLIPALKPWRSIGNLITLIVGILCVSVMFFS HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796