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The map label for this gene is yedQ [H]

Identifier: 209398052

GI number: 209398052

Start: 2558480

End: 2560174

Strand: Reverse

Name: yedQ [H]

Synonym: ECH74115_2732

Alternate gene names: 209398052

Gene position: 2560174-2558480 (Counterclockwise)

Preceding gene: 209396454

Following gene: 209398242

Centisome position: 45.95

GC content: 51.62

Gene sequence:

>1695_bases
GTGCAGCACGAGACAAAAATGGAAAACCAGAGCTGGTTGAAAAAACTCGCACGCCGCCTAGGGCCTGGTCATATCGTTAA
TCTCTGCTTTATCGTGGTATTGCTTTTTTCCACCTTGCTGACCTGGCGTGAAGTAGTGGTGCTGGAAGATGCCTATATCT
CCAGCCAGCGTAATCATCTGGAAAACGTAGCCAACGCGCTCGATAAGCATTTGCAGTATAACGTCGACAAACTGATCTTT
TTGCGTAATGGCATGCGCGAAGCTCTCGTAGCGCCACTGGATTTCACCTCTCTGCGTGATGCTGTAACCGAGTTCGAACA
GCATCGCGACGAGCACGCCTGGCAAATCGAACTCAACCGACGACGCACCCTGTCAGTCAATGGCGTATCGGATGCATTAG
TCAGCGAGGGGAATCTCCTGTCTCGCGAAAATGAAAGCCTCGACAATGAAATTACCGCTGCACTGGAAGTTGGTTACTTG
CTGCGACTGGCACACAACTCCTCGTCGATGGTAGAACAGGCGATGTATGTCTCGCGTGCCGGATTTTACGTTTCGACGCA
GCCGACCTTGTTTACGCGCAATGTCCCGACGCGTTATTACGGCTATGTCACCCAACCCTGGTTTATCGGCCATTCACAAC
GAGAAAATCGTCACCGCGCGGTACGCTGGTTCACTTCGCAACCGGAACACGCCAGCAATACTGAACCGCAGGTTACCGTC
AGTGTTCCGGTAGACAGTAATAACTACTGGTATGGCGTGCTGGGGATGAGTATTCCCGTGCGTACTATGCAGCAATTTTT
AAGAAACGCCATCGATAAAAACCTCGATGGTGAGTATCAGCTCTATGACAGTAAGCTGAGATTTTTGACCTCTTCCAATC
CTGACCATCCAACAGGGAATATTTTTGATCCTCGTGAACTGGCCTTGCTGGCGCAGGCAATGGAACATGACACGCGGGGC
GGCATTCGTATGGACAGTCGCTATGTTAGCTGGGAACGTCTGGACCATTTCGACGGTGTGCTGGTGCGCGTCCATACGTT
AAGCGAAGGCGTGCGCGGCGATTTCGGCAGTATCAGCATTGCATTAACCCTGCTGTGGGCGCTCTTTACCACCATGTTAC
TCATCTCCTGGTATGTGATTCGCCGGATGGTCAGCAACATGTATGTTCTGCAAAGCTCGTTGCAGTGGCAGGCGTGGCAC
GACACCTTAACGCGTTTATATAACCGTGGCGCACTGTTCGAAAAAGCCCGTCCGCTCGCGAAATTGTGTCAGACGCACCA
ACATCCTTTTTCTGTCATTCAGGTCGATCTTGACCATTTTAAAGCGATTAATGACCGCTTTGGTCATCAGGCGGGCGACC
GTGTTCTTTCTCATGCTGCCGGATTAATTAGCAGTTCCTTGCGTGCGCAGGACGTTGCCGGGCGGGTCGGTGGTGAGGAG
TTTTGTGTGATTCTGCCAGGCGCGAGTCTGACGGAGGCTGCGGAAGTCGCAGAACGTATTCGCCTGAAGTTAAATGAAAA
AGAGATGTTGATTGCTAAGAGTACGACGATACGCATCAGTGCCTCGTTGGGGGTAAGTAGCAGCGAGGAAACCGGTGATT
ATGATTTTGAACAACTCCAGTCACTGGCCGACCGTCGGCTTTATCTCGCTAAACAGGCTGGGCGCAATCGGGTATTCGCG
AGCGATAACGCTTAA

Upstream 100 bases:

>100_bases
GCGTCTTATCATGCCACCATTATAAAATTATCGCTGTTTTGCGGTACGCTATCGCCAGGTTATGCCAGAATCATAAAAAA
GCAGGTGGGGAGTCGTCAGG

Downstream 100 bases:

>100_bases
CGGGCGGAGAAAAAATGGTCCAGCCCTTCACGCCATCCTTCCGGTCCTTCACGCTGCGTTCGCCAGACGCGGGCCGGATC
CTCATCATGCAGATGCACCC

Product: diguanylate cyclase (GGDEF) domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MQHETKMENQSWLKKLARRLGPGHIVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANALDKHLQYNVDKLIF
LRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWQIELNRRRTLSVNGVSDALVSEGNLLSRENESLDNEITAALEVGYL
LRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTV
SVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRG
GIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWH
DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE
FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA
SDNA

Sequences:

>Translated_564_residues
MQHETKMENQSWLKKLARRLGPGHIVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANALDKHLQYNVDKLIF
LRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWQIELNRRRTLSVNGVSDALVSEGNLLSRENESLDNEITAALEVGYL
LRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTV
SVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRG
GIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWH
DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE
FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA
SDNA
>Mature_564_residues
MQHETKMENQSWLKKLARRLGPGHIVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANALDKHLQYNVDKLIF
LRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWQIELNRRRTLSVNGVSDALVSEGNLLSRENESLDNEITAALEVGYL
LRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTV
SVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRG
GIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWH
DTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE
FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFA
SDNA

Specific function: Involves in the regulation of cellulose production [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082007, Length=564, Percent_Identity=99.468085106383, Blast_Score=1162, Evalue=0.0,
Organism=Escherichia coli, GI145693134, Length=187, Percent_Identity=35.2941176470588, Blast_Score=102, Evalue=7e-23,
Organism=Escherichia coli, GI1787262, Length=246, Percent_Identity=30.8943089430894, Blast_Score=102, Evalue=7e-23,
Organism=Escherichia coli, GI1788381, Length=165, Percent_Identity=35.1515151515151, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI87081881, Length=172, Percent_Identity=35.4651162790698, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1787802, Length=171, Percent_Identity=37.4269005847953, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1786584, Length=164, Percent_Identity=35.9756097560976, Blast_Score=92, Evalue=9e-20,
Organism=Escherichia coli, GI87081974, Length=220, Percent_Identity=30, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1788085, Length=190, Percent_Identity=31.0526315789474, Blast_Score=80, Evalue=5e-16,
Organism=Escherichia coli, GI87081977, Length=164, Percent_Identity=32.9268292682927, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1787056, Length=171, Percent_Identity=32.1637426900585, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787816, Length=130, Percent_Identity=36.1538461538462, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787541, Length=172, Percent_Identity=33.7209302325581, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 64288; Mature: 64288

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHETKMENQSWLKKLARRLGPGHIVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHL
CCCCHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHH
ENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWQIELNR
HHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECC
RRTLSVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRA
CEEEEECCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTV
CEEEECCCEEEECCCCCHHEEEECCCEEECCCCCCCCHHHEEEECCCCCCCCCCCCEEEE
SVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGN
EEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHEECCCCCCCCCC
IFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISI
CCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHCCCCEEEEEEEHHCCCCCCCCHHHH
ALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCHHH
KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE
HHHHCCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ
EEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHH
SLADRRLYLAKQAGRNRVFASDNA
HHHHHHHHHHHHCCCCCEEECCCC
>Mature Secondary Structure
MQHETKMENQSWLKKLARRLGPGHIVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHL
CCCCHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHH
ENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWQIELNR
HHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECC
RRTLSVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRA
CEEEEECCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTV
CEEEECCCEEEECCCCCHHEEEECCCEEECCCCCCCCHHHEEEECCCCCCCCCCCCEEEE
SVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGN
EEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHEECCCCCCCCCC
IFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISI
CCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHCCCCEEEEEEEHHCCCCCCCCHHHH
ALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCHHH
KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEE
HHHHCCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
FCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQ
EEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHH
SLADRRLYLAKQAGRNRVFASDNA
HHHHHHHHHHHHCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]