| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209397947
Identifier: 209397947
GI number: 209397947
Start: 2517997
End: 2518320
Strand: Direct
Name: 209397947
Synonym: ECH74115_2678
Alternate gene names: NA
Gene position: 2517997-2518320 (Clockwise)
Preceding gene: 209398146
Following gene: 209398757
Centisome position: 45.19
GC content: 54.01
Gene sequence:
>324_bases ATGACCGACACCACCATGCAATTGCTCAGTCAGGGCACAGACCACGTGAAAGTGCCGGATTTTGATATTCTCGCGGAGGG TAAAACGCTGTCAGGCGTGGCAGAGCGCCTGATGAGCCTGTCACTGACCGACAACCGGGGATTTGAGGCGGACCAGCTCA CCATCACGCTGGATGATGCAGATGGTCAGTTGCAGCTACCGCCACGGGGCGCGCGCCTGACGGTTCTCATTGGCTGGAAA GGAGAACCGCTGACAGAAAAAGGCACTTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTT TTGA
Upstream 100 bases:
>100_bases CGTAATCTCACCCCTGCGCCGTTCTCCCGCCACGGCGACAACAAAAAGCAGTAACCCCCTCCGCACGCACATGCGACCAT GCCGCACAGGGAGGGAACAG
Downstream 100 bases:
>100_bases ACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACAT GTCTTTTTAGGAAAGTACTG
Product: putative tail protein
Products: NA
Alternate protein names: Phage Late Control D Family Protein; Regulator Of Late Gene Expression; Late Control Gene D Protein; Gene D Protein; Phage Protein D; Phage Late Control Gene D Protein; Prophage Tail Protein; Phage Protein; Fels-2 Prophage Protein; Bacteriophage-Related Tail D Protein; Tail Assembly T; Late Gene Regulator; Phage Tail Protein; Regulator Of Late Phage Gene Expression; Gene Late Control D Protein; Phage-Related Late Control Gene Protein; Bacteriophage P2 Tail Protein GPD; Bacteriophage Late Gene Regulator; Phage Late Control Gene D Protein-Like Protein; Late Control Gene D Protein Prophage; Bacteriophage Late Gene Control Protein D; Tail Protein D; Bacteriophage Tail Protein D; Phage Regulator
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MTDTTMQLLSQGTDHVKVPDFDILAEGKTLSGVAERLMSLSLTDNRGFEADQLTITLDDADGQLQLPPRGARLTVLIGWK GEPLTEKGTCRFNLSMQHPFQLSLSVF
Sequences:
>Translated_107_residues MTDTTMQLLSQGTDHVKVPDFDILAEGKTLSGVAERLMSLSLTDNRGFEADQLTITLDDADGQLQLPPRGARLTVLIGWK GEPLTEKGTCRFNLSMQHPFQLSLSVF >Mature_106_residues TDTTMQLLSQGTDHVKVPDFDILAEGKTLSGVAERLMSLSLTDNRGFEADQLTITLDDADGQLQLPPRGARLTVLIGWKG EPLTEKGTCRFNLSMQHPFQLSLSVF
Specific function: Unknown
COG id: COG3500
COG function: function code R; Phage protein D
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11778; Mature: 11646
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTTMQLLSQGTDHVKVPDFDILAEGKTLSGVAERLMSLSLTDNRGFEADQLTITLDDA CCCHHHHHHHCCCCEEECCCEEEEECCCCHHHHHHHHHEEEECCCCCCCCCEEEEEEECC DGQLQLPPRGARLTVLIGWKGEPLTEKGTCRFNLSMQHPFQLSLSVF CCEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEEEC >Mature Secondary Structure TDTTMQLLSQGTDHVKVPDFDILAEGKTLSGVAERLMSLSLTDNRGFEADQLTITLDDA CCHHHHHHHCCCCEEECCCEEEEECCCCHHHHHHHHHEEEECCCCCCCCCEEEEEEECC DGQLQLPPRGARLTVLIGWKGEPLTEKGTCRFNLSMQHPFQLSLSVF CCEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA