| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is yjjA [H]
Identifier: 209397906
GI number: 209397906
Start: 5531677
End: 5532174
Strand: Reverse
Name: yjjA [H]
Synonym: ECH74115_5873
Alternate gene names: 209397906
Gene position: 5532174-5531677 (Counterclockwise)
Preceding gene: 209399469
Following gene: 209398633
Centisome position: 99.28
GC content: 50.2
Gene sequence:
>498_bases ATGATGATGAAAACTGTTAAACATCTTCTGTGCTGTGCCATTGCCGCCAGCGCATTAATTTCCACCGGGGTGCATGCTGC GTCCTGGAAAGATGCGCTCTCCAGCGCCGCCAGCGAACTTGGCAACCAAAACAGCACGACACAGGAAGGCGGTTGGTCGC TCGCGTCATTAACTAACTTGCTTAGCAGCGGAAACCAGGCCTTAAGCGCAGATAACATGAACAATGCCGCAGGCATTCTG CAATACTGCGCGAAGCAAAAGCTGGCTTCGGTAACCGATGTCGAAAACATCAAGAACCAGGTGCTGGAAAAGCTGGGCCT GAACAGTGAAGAGCAAAAAGAAGACACCAACTATCTGGACGGCATTCAGGGTTTGCTGAAAACCAAAGATGGTCAGCAAC TCAATCTGGATAACATCGGAACAACTCCGCTGGCAGAAAAGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAGCAGGGG CTGAACTTCATTTCCTGA
Upstream 100 bases:
>100_bases GGTGATCTTCAACTGGGATAGCTACCGTAGCCGTGTAACAGGTAAAGAGTATTAATCCCCGTTTCTGGCGGTATACTGCG ACACAATTCCACCTTGAGTA
Downstream 100 bases:
>100_bases ACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTTC CCCCTGTTACACGGGAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Protein P-18 [H]
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MMMKTVKHLLCCAIAASALISTGVHAASWKDALSSAASELGNQNSTTQEGGWSLASLTNLLSSGNQALSADNMNNAAGIL QYCAKQKLASVTDVENIKNQVLEKLGLNSEEQKEDTNYLDGIQGLLKTKDGQQLNLDNIGTTPLAEKVKTKACDLVLKQG LNFIS
Sequences:
>Translated_165_residues MMMKTVKHLLCCAIAASALISTGVHAASWKDALSSAASELGNQNSTTQEGGWSLASLTNLLSSGNQALSADNMNNAAGIL QYCAKQKLASVTDVENIKNQVLEKLGLNSEEQKEDTNYLDGIQGLLKTKDGQQLNLDNIGTTPLAEKVKTKACDLVLKQG LNFIS >Mature_165_residues MMMKTVKHLLCCAIAASALISTGVHAASWKDALSSAASELGNQNSTTQEGGWSLASLTNLLSSGNQALSADNMNNAAGIL QYCAKQKLASVTDVENIKNQVLEKLGLNSEEQKEDTNYLDGIQGLLKTKDGQQLNLDNIGTTPLAEKVKTKACDLVLKQG LNFIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082434, Length=164, Percent_Identity=99.390243902439, Blast_Score=324, Evalue=2e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019637 [H]
Pfam domain/function: PF10696 DUF2501 [H]
EC number: NA
Molecular weight: Translated: 17512; Mature: 17512
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMKTVKHLLCCAIAASALISTGVHAASWKDALSSAASELGNQNSTTQEGGWSLASLTNL CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LSSGNQALSADNMNNAAGILQYCAKQKLASVTDVENIKNQVLEKLGLNSEEQKEDTNYLD HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GIQGLLKTKDGQQLNLDNIGTTPLAEKVKTKACDLVLKQGLNFIS HHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MMMKTVKHLLCCAIAASALISTGVHAASWKDALSSAASELGNQNSTTQEGGWSLASLTNL CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LSSGNQALSADNMNNAAGILQYCAKQKLASVTDVENIKNQVLEKLGLNSEEQKEDTNYLD HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GIQGLLKTKDGQQLNLDNIGTTPLAEKVKTKACDLVLKQGLNFIS HHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2844800; 7610040; 9278503 [H]