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The map label for this gene is yddR [H]

Identifier: 209397657

GI number: 209397657

Start: 428895

End: 429671

Strand: Reverse

Name: yddR [H]

Synonym: ECH74115_0420

Alternate gene names: 209397657

Gene position: 429671-428895 (Counterclockwise)

Preceding gene: 209397499

Following gene: 209396742

Centisome position: 7.71

GC content: 47.75

Gene sequence:

>777_bases
ATGAAAATTACGCAAATTCGTAATGCCACCCAAATTATCCAATACGCTGGCAAAACATTTCTTATCGACCCGTTACTCGC
GCCTAAAGGAAGTTATCCGGGTTTTGCCGGAACGGCACGCGCAGAAATCCGCAATCCAACGGTAGAATTACCGTGCGATT
TAACAACGTTACTCAACGTTGACGCCCTAATCGTGACCCATTTGCATGAAGATCACTGGGACGAAACAGCCTCCCGCGTC
GTCCCTAAAGATAAACTGATTTATGTGCAAAATGAGCAAGATGCTGAATCACTGAATAAACAAGGATTTACGCATCTTAC
CGTACTTACCGACGAGACTAAATTTGGCGATATTACTCTGCATAAAACGACAGGGCAGCACGGCTCCGATCGCACCTATG
CCGACCCGGCGATGGCGAAGCGTTTAGGCGCAGCTTGCGGCGTTGTTTTCCAGCACCCGACAGAGAAAACGCTCTATCTG
GCTGGCGATACCCTCTGGCGTGACGACGTCGAGGCTACAATGCTAACTTTCCAACCAGAAGTGGTTGTGTTGAATGCCGG
ATTTGCGCATGTTCTGGGGCATGGCGCGATAATTATGGGAGCAGAAGATATTCTCAAAACACATTTTACCCTCCCAGAAG
CGCAAATTATCGCGACACATATGGAGGCCGTAAACCACTGTTTGCTGACGCGTGATGCGCTCAAGGAATACGCCAGAGAT
AATCAAATTATCGAATTTGTGAACGTACCAGAAGATGGTGAAACGTTGACATTCTAA

Upstream 100 bases:

>100_bases
AATTTGGCCCATTCTCATCGTTATTCGCCCATTTGCCCACATGCACAGTACGGGCTGCACGCTACGCTAATGACATCAAT
ACTGTGATGTGGAGCAAATC

Downstream 100 bases:

>100_bases
TTCGGAGATAAAGAGTGTTATGCGCCCGCTAACTGTTGCCATTATCGCCGTTGCCGGTTTTAGTCCTTTTCACCTTTCCG
TACCGTTTATCGTGTTTAGT

Product: beta-lactamase fold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKITQIRNATQIIQYAGKTFLIDPLLAPKGSYPGFAGTARAEIRNPTVELPCDLTTLLNVDALIVTHLHEDHWDETASRV
VPKDKLIYVQNEQDAESLNKQGFTHLTVLTDETKFGDITLHKTTGQHGSDRTYADPAMAKRLGAACGVVFQHPTEKTLYL
AGDTLWRDDVEATMLTFQPEVVVLNAGFAHVLGHGAIIMGAEDILKTHFTLPEAQIIATHMEAVNHCLLTRDALKEYARD
NQIIEFVNVPEDGETLTF

Sequences:

>Translated_258_residues
MKITQIRNATQIIQYAGKTFLIDPLLAPKGSYPGFAGTARAEIRNPTVELPCDLTTLLNVDALIVTHLHEDHWDETASRV
VPKDKLIYVQNEQDAESLNKQGFTHLTVLTDETKFGDITLHKTTGQHGSDRTYADPAMAKRLGAACGVVFQHPTEKTLYL
AGDTLWRDDVEATMLTFQPEVVVLNAGFAHVLGHGAIIMGAEDILKTHFTLPEAQIIATHMEAVNHCLLTRDALKEYARD
NQIIEFVNVPEDGETLTF
>Mature_258_residues
MKITQIRNATQIIQYAGKTFLIDPLLAPKGSYPGFAGTARAEIRNPTVELPCDLTTLLNVDALIVTHLHEDHWDETASRV
VPKDKLIYVQNEQDAESLNKQGFTHLTVLTDETKFGDITLHKTTGQHGSDRTYADPAMAKRLGAACGVVFQHPTEKTLYL
AGDTLWRDDVEATMLTFQPEVVVLNAGFAHVLGHGAIIMGAEDILKTHFTLPEAQIIATHMEAVNHCLLTRDALKEYARD
NQIIEFVNVPEDGETLTF

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0173 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 28588; Mature: 28588

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITQIRNATQIIQYAGKTFLIDPLLAPKGSYPGFAGTARAEIRNPTVELPCDLTTLLNV
CCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCCEECCCCHHHHHCH
DALIVTHLHEDHWDETASRVVPKDKLIYVQNEQDAESLNKQGFTHLTVLTDETKFGDITL
HHHEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCCEEEEEEECCCCCCCEEE
HKTTGQHGSDRTYADPAMAKRLGAACGVVFQHPTEKTLYLAGDTLWRDDVEATMLTFQPE
EECCCCCCCCCCCCCHHHHHHHHHHHCEEEECCCCCEEEEECCCEECCCCCEEEEEECCC
VVVLNAGFAHVLGHGAIIMGAEDILKTHFTLPEAQIIATHMEAVNHCLLTRDALKEYARD
EEEEECCHHHHHCCCEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
NQIIEFVNVPEDGETLTF
CCEEEEEECCCCCCEECC
>Mature Secondary Structure
MKITQIRNATQIIQYAGKTFLIDPLLAPKGSYPGFAGTARAEIRNPTVELPCDLTTLLNV
CCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCCEECCCCHHHHHCH
DALIVTHLHEDHWDETASRVVPKDKLIYVQNEQDAESLNKQGFTHLTVLTDETKFGDITL
HHHEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCCEEEEEEECCCCCCCEEE
HKTTGQHGSDRTYADPAMAKRLGAACGVVFQHPTEKTLYLAGDTLWRDDVEATMLTFQPE
EECCCCCCCCCCCCCHHHHHHHHHHHCEEEECCCCCEEEEECCCEECCCCCEEEEEECCC
VVVLNAGFAHVLGHGAIIMGAEDILKTHFTLPEAQIIATHMEAVNHCLLTRDALKEYARD
EEEEECCHHHHHCCCEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
NQIIEFVNVPEDGETLTF
CCEEEEEECCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]