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The map label for this gene is pbl

Identifier: 209397630

GI number: 209397630

Start: 3820977

End: 3821480

Strand: Direct

Name: pbl

Synonym: ECH74115_4125

Alternate gene names: 209397630

Gene position: 3820977-3821480 (Clockwise)

Preceding gene: 209398670

Following gene: 209396812

Centisome position: 68.57

GC content: 34.33

Gene sequence:

>504_bases
ATGCGCTCACCAAAAGTTAAATTCTTAACCATCTTCACGCTTTCTATATTAATTACAAAAATGTCTTTCGCCAGTAGCGC
TTGCTTTAATGAAGCAGGAACAATGTTCAGAATCGAACCAAATTTGATTAAAGCTATCGCTCTTGTTGAAAGCAATCTAA
AAAAGGATAGCATAGGGAAGAACAGAGATAAGAAAAACAATATAAAGAGTTTTGATTATGGTTTAATGCAGATAAACCAG
ATGCACATTCCCATGTTAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAATCCCTGCCTGAACATTAA
AATAGGAACCGAGATTTTATATAAGCATTTTTCCCGTTGTGGAATGACGTGGCAATGCCTGGGGACTTATAATGCGGGTT
TTGCAATGGATAACCAAAAAAAGCGACTGCAATATGCCAAAAAAATATATATTGTATATACCAGGCTTAATGAACTAGAC
AATCGTAAGGCTTTAGCAAAATGA

Upstream 100 bases:

>100_bases
TAAAATTGAATGGTAGACGATTGACCAAATAAATTATTAACGAGATACTGTTTATAATAGTATCTCGTTCCTTTTATACA
ATCCTGACTCATAAAGATAT

Downstream 100 bases:

>100_bases
GCCTAAAGCCTCTTTTTTTTATATAGTGCACACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACAT
CTAATTTCTTCATGATATTG

Product: lytic transglycosylase PilT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MRSPKVKFLTIFTLSILITKMSFASSACFNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKKNNIKSFDYGLMQINQ
MHIPMLKKRGIIKDERDLLDNPCLNIKIGTEILYKHFSRCGMTWQCLGTYNAGFAMDNQKKRLQYAKKIYIVYTRLNELD
NRKALAK

Sequences:

>Translated_167_residues
MRSPKVKFLTIFTLSILITKMSFASSACFNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKKNNIKSFDYGLMQINQ
MHIPMLKKRGIIKDERDLLDNPCLNIKIGTEILYKHFSRCGMTWQCLGTYNAGFAMDNQKKRLQYAKKIYIVYTRLNELD
NRKALAK
>Mature_167_residues
MRSPKVKFLTIFTLSILITKMSFASSACFNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKKNNIKSFDYGLMQINQ
MHIPMLKKRGIIKDERDLLDNPCLNIKIGTEILYKHFSRCGMTWQCLGTYNAGFAMDNQKKRLQYAKKIYIVYTRLNELD
NRKALAK

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Periplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iagB/ipgF/P19 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PBL_ECO57 (Q8X6H3)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   C85938
- PIR:   G91092
- RefSeq:   NP_289408.1
- RefSeq:   NP_311738.1
- ProteinModelPortal:   Q8X6H3
- SMR:   Q8X6H3
- EnsemblBacteria:   EBESCT00000025320
- EnsemblBacteria:   EBESCT00000056915
- GeneID:   916469
- GeneID:   958323
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z4175
- KEGG:   ecs:ECs3711
- GeneTree:   EBGT00050000010873
- HOGENOM:   HBG757470
- OMA:   SIFRIEP
- ProtClustDB:   CLSK420527
- BioCyc:   ECOL83334:ECS3711-MONOMER
- InterPro:   IPR008258

Pfam domain/function: PF01464 SLT

EC number: NA

Molecular weight: Translated: 19307; Mature: 19307

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPKVKFLTIFTLSILITKMSFASSACFNEAGTMFRIEPNLIKAIALVESNLKKDSIGK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCCCCCCC
NRDKKNNIKSFDYGLMQINQMHIPMLKKRGIIKDERDLLDNPCLNIKIGTEILYKHFSRC
CCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHCCCCEEEEECHHHHHHHHHHC
GMTWQCLGTYNAGFAMDNQKKRLQYAKKIYIVYTRLNELDNRKALAK
CCEEEEEECCCCCCCCCCHHHHHHHHHHHEEEEEEHHHCCCCCCCCC
>Mature Secondary Structure
MRSPKVKFLTIFTLSILITKMSFASSACFNEAGTMFRIEPNLIKAIALVESNLKKDSIGK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCCCCCCC
NRDKKNNIKSFDYGLMQINQMHIPMLKKRGIIKDERDLLDNPCLNIKIGTEILYKHFSRC
CCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHCCCCEEEEECHHHHHHHHHHC
GMTWQCLGTYNAGFAMDNQKKRLQYAKKIYIVYTRLNELDNRKALAK
CCEEEEEECCCCCCCCCCHHHHHHHHHHHEEEEEEHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796