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The map label for this gene is insD1 [C]

Identifier: 209397368

GI number: 209397368

Start: 313766

End: 314131

Strand: Reverse

Name: insD1 [C]

Synonym: ECH74115_0305

Alternate gene names: 209397368

Gene position: 314131-313766 (Counterclockwise)

Preceding gene: 209399178

Following gene: 209398267

Centisome position: 5.64

GC content: 48.36

Gene sequence:

>366_bases
GTGCAGGATGTCATGTTAGGAGCGATAGAAAAACGCTTTGGCGATAAAGTACCGGAACAGTCCATCCAGTGGCTGACAGA
TAACGGTTCAGCGTATAGAGCGCATGAAACACGGCAGTTCGCCAGAGAGTTGAATCTGGAGCCCTGCACAACGGCAATCA
GCAGTCCTCAGAGTAATGGAATTGCAGAAAGGTTCGTGAAAACGATGAAGGAAGACTACATCGCGTTCATGCCGAAACCG
AATGTAAGAACGGCATTGCATAATCTTGCAGTGGCGATCGAACATTACAATGAAAACCATCCGCACAGTGCGTTGGGTTA
TCGCTCTCCGCGAGAATATCGACGTCAGCGGGTAACGTTAACTTAA

Upstream 100 bases:

>100_bases
TGTTATGAGCAAGGATTGGCCCAGATGAATCGCCCTGGACTGTTGCGATCGTGAAGCCATAGACTGGGCCGCAAGCACGG
GAGGTTACGATAAAGCGACA

Downstream 100 bases:

>100_bases
GATACCCCCCCTGTCTGGAAATAAGGGGGCAAGAACAATGATCAGATTCCCTGGTGAGTAAGAATTTTACTTTCTGAACT
CCTCTGAGAGTATTGACTTG

Product: IS2 ORF2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MQDVMLGAIEKRFGDKVPEQSIQWLTDNGSAYRAHETRQFARELNLEPCTTAISSPQSNGIAERFVKTMKEDYIAFMPKP
NVRTALHNLAVAIEHYNENHPHSALGYRSPREYRRQRVTLT

Sequences:

>Translated_121_residues
MQDVMLGAIEKRFGDKVPEQSIQWLTDNGSAYRAHETRQFARELNLEPCTTAISSPQSNGIAERFVKTMKEDYIAFMPKP
NVRTALHNLAVAIEHYNENHPHSALGYRSPREYRRQRVTLT
>Mature_121_residues
MQDVMLGAIEKRFGDKVPEQSIQWLTDNGSAYRAHETRQFARELNLEPCTTAISSPQSNGIAERFVKTMKEDYIAFMPKP
NVRTALHNLAVAIEHYNENHPHSALGYRSPREYRRQRVTLT

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=119, Percent_Identity=69.7478991596639, Blast_Score=179, Evalue=4e-47,
Organism=Escherichia coli, GI1789424, Length=119, Percent_Identity=69.7478991596639, Blast_Score=179, Evalue=4e-47,
Organism=Escherichia coli, GI1789224, Length=119, Percent_Identity=69.7478991596639, Blast_Score=179, Evalue=4e-47,
Organism=Escherichia coli, GI1788305, Length=119, Percent_Identity=69.7478991596639, Blast_Score=179, Evalue=4e-47,
Organism=Escherichia coli, GI1787669, Length=119, Percent_Identity=69.7478991596639, Blast_Score=179, Evalue=4e-47,
Organism=Escherichia coli, GI1786558, Length=119, Percent_Identity=69.7478991596639, Blast_Score=179, Evalue=4e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 13945; Mature: 13945

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDVMLGAIEKRFGDKVPEQSIQWLTDNGSAYRAHETRQFARELNLEPCTTAISSPQSNG
CCCHHHHHHHHHHCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHCCCCHHHHHHCCCCCCC
IAERFVKTMKEDYIAFMPKPNVRTALHNLAVAIEHYNENHPHSALGYRSPREYRRQRVTL
HHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCC
T
C
>Mature Secondary Structure
MQDVMLGAIEKRFGDKVPEQSIQWLTDNGSAYRAHETRQFARELNLEPCTTAISSPQSNG
CCCHHHHHHHHHHCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHCCCCHHHHHHCCCCCCC
IAERFVKTMKEDYIAFMPKPNVRTALHNLAVAIEHYNENHPHSALGYRSPREYRRQRVTL
HHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCC
T
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA