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The map label for this gene is stfR [H]

Identifier: 209397061

GI number: 209397061

Start: 1720530

End: 1721834

Strand: Direct

Name: stfR [H]

Synonym: ECH74115_1804

Alternate gene names: 209397061

Gene position: 1720530-1721834 (Clockwise)

Preceding gene: 209398021

Following gene: 209399194

Centisome position: 30.88

GC content: 59.46

Gene sequence:

>1305_bases
ATGACAGTAAAAATTTCTGGCGTGCTTAAAGATGGCACAGGAAAACCAGTACAGAACTGCACCATTGTGCTGAAGGCCAG
ACGAACCAGCAGCACGGTGGTGGTGAACACGGTGGCCTCTGAAAATCCGGATGAAGCCGGACGTTACAGCATGGATGTTG
AGTACGGTCAGTACAGCGTCATTCTGTTGGTGGAGGGATTTCCTCCGTCACATGCCGGGACCATCACCGTGTATGAAGAT
TCTCAACCCGGTACGCTGAATGATTTTCTCGGTGCCATGTCGGAGGATGACGTCCGGCCGGAGGCACTGCGTCGTTTTGA
ACTGATGGTGGAAGAAGCGGCGCGTCACGCTGAGGAGGCGAAGAAGAATGCCGGAGAGGCGGAGACGTCCGCGAGGAATG
CCGGCATATCAGCCAGTCAGGCAGAAGAGAACGCTGCAAATGCTGACACTTCAGCAGGGGATGCATCGGAGTCAGCCCGG
CAGGCGGCAGAAAGTGCAGCCGCTGCAAAGCAGTCAGAGGAGGCGTCCTCGTCCTCGGCCTCTGCGGCCGCTCAAAAAGC
CAGTGAGTCATTACAAAGTGCAACAGATGCTGAGTTGTCAAAAAAGACGGCAGAAAGTGCAGCCGGTAATGCAGCCAGGG
ATGCAACGACCGCAGCAGAAAAAGCCCGGGAGTCAGCAGAAAGCGCACAGTCAGCGGAACAAAGCAGGATAGCGGCGGAA
GAAGCCGTAAACCGAATCCCCACCGTGGTGGGGCCTCCCGGGCCAAAGGGGGAACCGGGGCCCGCGGGTCCTCAGGGGCC
GAAGGGAGATAAAGGAGAGCGTGGAGACACCGGCCCGGCAGGGGCAACCGGCGAACGGGGACCGGCAGGTGATGCTGGTC
CGGCAGGCCCGCAGGGGCCGAAAGGTGACAGGGGAGAGACCGGTCTGACGGGAAATGCAGGTCCACAGGGTCCAAAGGGA
GACACCGGGGCAGCAGGCCCGGCAGGCCCACAGGGACCGAAAGGAGAAACAGGTGCGGCTGGCCCGGTGGGGGCAACCGG
ACCTCAGGGACCGAAGGGCGACCCGGGGGAGACACAAATCCGTTTTCGTCTGGGGCCGGCGAGCATTATTGAGACAAACA
GCCATGGCTGGTTCCCGGGTACAGATGGTGCGCTCATCACCGGACTGACCTTTCTTGCCCCCAAAGATACCACACGGGTT
CAGGGTTTTTTTCAGCATTTGCAGGTCAGGTTTGGTGACGGGCCGTGGCAGGATGTTAAGGGGCTTGATGAAGTGGGCAG
TGATACAGGCAGAACAGGAGAATGA

Upstream 100 bases:

>100_bases
TCCACCTTATGGGGTGAACTGCGTTTGAGGAAACGTAAAGTTACACTGTCCTGAAGCCCGTGGCGTCACTGCTGCGGGCT
TTTTTTATTGGTGGAAAAGT

Downstream 100 bases:

>100_bases
CATGAACATACTAAAAAAACTTATGCAGCGTCTGTGCGGGCACGGAAAGCATGATGACCGTGAAGACGGGGAGTTACTTA
CAGCACAACTGCGTCTGGGG

Product: tail fiber protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MTVKISGVLKDGTGKPVQNCTIVLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYED
SQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEAKKNAGEAETSARNAGISASQAEENAANADTSAGDASESAR
QAAESAAAAKQSEEASSSSASAAAQKASESLQSATDAELSKKTAESAAGNAARDATTAAEKARESAESAQSAEQSRIAAE
EAVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPAGDAGPAGPQGPKGDRGETGLTGNAGPQGPKG
DTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPASIIETNSHGWFPGTDGALITGLTFLAPKDTTRV
QGFFQHLQVRFGDGPWQDVKGLDEVGSDTGRTGE

Sequences:

>Translated_434_residues
MTVKISGVLKDGTGKPVQNCTIVLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYED
SQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEAKKNAGEAETSARNAGISASQAEENAANADTSAGDASESAR
QAAESAAAAKQSEEASSSSASAAAQKASESLQSATDAELSKKTAESAAGNAARDATTAAEKARESAESAQSAEQSRIAAE
EAVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPAGDAGPAGPQGPKGDRGETGLTGNAGPQGPKG
DTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPASIIETNSHGWFPGTDGALITGLTFLAPKDTTRV
QGFFQHLQVRFGDGPWQDVKGLDEVGSDTGRTGE
>Mature_433_residues
TVKISGVLKDGTGKPVQNCTIVLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDS
QPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEAKKNAGEAETSARNAGISASQAEENAANADTSAGDASESARQ
AAESAAAAKQSEEASSSSASAAAQKASESLQSATDAELSKKTAESAAGNAARDATTAAEKARESAESAQSAEQSRIAAEE
AVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPAGDAGPAGPQGPKGDRGETGLTGNAGPQGPKGD
TGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPASIIETNSHGWFPGTDGALITGLTFLAPKDTTRVQ
GFFQHLQVRFGDGPWQDVKGLDEVGSDTGRTGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tail fiber family [H]

Homologues:

Organism=Homo sapiens, GI55743098, Length=109, Percent_Identity=47.7064220183486, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI55743106, Length=109, Percent_Identity=47.7064220183486, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI56847616, Length=115, Percent_Identity=48.695652173913, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI240255535, Length=109, Percent_Identity=47.7064220183486, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI65301115, Length=115, Percent_Identity=48.695652173913, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI48762934, Length=136, Percent_Identity=46.3235294117647, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI5803080, Length=111, Percent_Identity=46.8468468468468, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI115392133, Length=126, Percent_Identity=47.6190476190476, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI183583553, Length=119, Percent_Identity=38.655462184874, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI115527062, Length=88, Percent_Identity=50, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI98985806, Length=118, Percent_Identity=46.6101694915254, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI98985810, Length=118, Percent_Identity=46.6101694915254, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI299523257, Length=118, Percent_Identity=46.6101694915254, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI115527066, Length=88, Percent_Identity=50, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI122937273, Length=120, Percent_Identity=45, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI299523253, Length=118, Percent_Identity=46.6101694915254, Blast_Score=66, Evalue=8e-11,
Organism=Homo sapiens, GI89363017, Length=94, Percent_Identity=54.2553191489362, Blast_Score=65, Evalue=1e-10,
Organism=Escherichia coli, GI87081892, Length=123, Percent_Identity=87.8048780487805, Blast_Score=237, Evalue=1e-63,
Organism=Caenorhabditis elegans, GI17569903, Length=132, Percent_Identity=46.2121212121212, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17551704, Length=191, Percent_Identity=34.0314136125654, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17535735, Length=125, Percent_Identity=44.8, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008969
- InterPro:   IPR014766
- InterPro:   IPR011083
- InterPro:   IPR005003
- InterPro:   IPR013609 [H]

Pfam domain/function: PF07484 Collar; PF03335 Phage_fiber; PF08400 phage_tail_N [H]

EC number: NA

Molecular weight: Translated: 43769; Mature: 43637

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKISGVLKDGTGKPVQNCTIVLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSV
CEEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCEEE
ILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEA
EEEEECCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KKNAGEAETSARNAGISASQAEENAANADTSAGDASESARQAAESAAAAKQSEEASSSSA
HHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
SAAAQKASESLQSATDAELSKKTAESAAGNAARDATTAAEKARESAESAQSAEQSRIAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPAGDAGPAGPQGP
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KGDRGETGLTGNAGPQGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
RFRLGPASIIETNSHGWFPGTDGALITGLTFLAPKDTTRVQGFFQHLQVRFGDGPWQDVK
EEEECCCCEEECCCCCCCCCCCCHHHHCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHH
GLDEVGSDTGRTGE
HHHHHCCCCCCCCC
>Mature Secondary Structure 
TVKISGVLKDGTGKPVQNCTIVLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSV
EEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCEEE
ILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEA
EEEEECCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KKNAGEAETSARNAGISASQAEENAANADTSAGDASESARQAAESAAAAKQSEEASSSSA
HHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
SAAAQKASESLQSATDAELSKKTAESAAGNAARDATTAAEKARESAESAQSAEQSRIAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPAGDAGPAGPQGP
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KGDRGETGLTGNAGPQGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
RFRLGPASIIETNSHGWFPGTDGALITGLTFLAPKDTTRVQGFFQHLQVRFGDGPWQDVK
EEEECCCCEEECCCCCCCCCCCCHHHHCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHH
GLDEVGSDTGRTGE
HHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]