| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is 209396944
Identifier: 209396944
GI number: 209396944
Start: 2115657
End: 2116079
Strand: Reverse
Name: 209396944
Synonym: ECH74115_2225
Alternate gene names: NA
Gene position: 2116079-2115657 (Counterclockwise)
Preceding gene: 209399261
Following gene: 209399234
Centisome position: 37.98
GC content: 52.25
Gene sequence:
>423_bases ATGGACGAAAAACAGTTGCAGGCTCTGGCTAACGAACTGGCCAAAAATCTCAAAACCCCTGAAGATCTCAGCCAGTTCGA TCGCCTGCTGAAGAAAATCAGCGTTGAGGCAGCTCTCAACGCTGAAATGTCCCACCATCTGGGCTACGATAAAAACCAGC CTAAACCGGGTGCCAACTCCCGCAATGGCTATTCCACAAAGACCGTTATCACCGGTGATGGCCACCTGGAACTACGCACT CCGCGCGATCGTGATGGCTCTTTTGAACCGCAACTTGTGAAGAAAAACCAGACCCGGATCACCGGGATGGATAACCAGAT CCTGTCGTTGTACGCCAAAGGCCTGACAACCCGCGAAATAGCGGCTGCGTTTAAAGAGCTGTATGACGCTGATGTCGTAA GCGTACAGCGAGGGCCGTATTGA
Upstream 100 bases:
>100_bases CGCCAGAACCGTATTGATATTTACTGAGGAGCCTGTACATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAA CATCAAAAGCAGGTTAATTT
Downstream 100 bases:
>100_bases CGGGGATGTGTTATTCAGCTGGCAGTGCTATGCGCCACGGAAGCAGTTCGCTGACCCGGTTGACCGGCCAGTCTGCTATG ACGCCAAGCACATGGCGAAG
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MDEKQLQALANELAKNLKTPEDLSQFDRLLKKISVEAALNAEMSHHLGYDKNQPKPGANSRNGYSTKTVITGDGHLELRT PRDRDGSFEPQLVKKNQTRITGMDNQILSLYAKGLTTREIAAAFKELYDADVVSVQRGPY
Sequences:
>Translated_140_residues MDEKQLQALANELAKNLKTPEDLSQFDRLLKKISVEAALNAEMSHHLGYDKNQPKPGANSRNGYSTKTVITGDGHLELRT PRDRDGSFEPQLVKKNQTRITGMDNQILSLYAKGLTTREIAAAFKELYDADVVSVQRGPY >Mature_140_residues MDEKQLQALANELAKNLKTPEDLSQFDRLLKKISVEAALNAEMSHHLGYDKNQPKPGANSRNGYSTKTVITGDGHLELRT PRDRDGSFEPQLVKKNQTRITGMDNQILSLYAKGLTTREIAAAFKELYDADVVSVQRGPY
Specific function: Required for the transposition of the insertion element [H]
COG id: COG3328
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 15646; Mature: 15646
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEKQLQALANELAKNLKTPEDLSQFDRLLKKISVEAALNAEMSHHLGYDKNQPKPGANS CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RNGYSTKTVITGDGHLELRTPRDRDGSFEPQLVKKNQTRITGMDNQILSLYAKGLTTREI CCCCCCEEEEECCCEEEEECCCCCCCCCCCHHHCCCCCEECCCCHHHHHHHHHCCCHHHH AAAFKELYDADVVSVQRGPY HHHHHHHHCCHHHHCCCCCC >Mature Secondary Structure MDEKQLQALANELAKNLKTPEDLSQFDRLLKKISVEAALNAEMSHHLGYDKNQPKPGANS CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RNGYSTKTVITGDGHLELRTPRDRDGSFEPQLVKKNQTRITGMDNQILSLYAKGLTTREI CCCCCCEEEEECCCEEEEECCCCCCCCCCCHHHCCCCCEECCCCHHHHHHHHHCCCHHHH AAAFKELYDADVVSVQRGPY HHHHHHHHCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1849509; 1327271; 11481430; 11481432 [H]