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The map label for this gene is yqeI [H]

Identifier: 209396874

GI number: 209396874

Start: 3815300

End: 3816109

Strand: Direct

Name: yqeI [H]

Synonym: ECH74115_4116

Alternate gene names: 209396874

Gene position: 3815300-3816109 (Clockwise)

Preceding gene: 209395725

Following gene: 209396618

Centisome position: 68.47

GC content: 39.75

Gene sequence:

>810_bases
ATGTACTGGATTATTAACGATAATATCGAGTTCTGGCCTGAGCACCGAAAATTAATATCGGTACATAACGCCGATCTTAA
CGTCGTTCTGACAACGCCAGCCAGTCGTTGTTTATCACTGCTACTTGAAGCTTTTCCTGATGTGGTTGCACAACAAGATT
TTTTCACCAGAGTCTGGGAAGAAGAAGGTATGCGTGTGCCTACTAACACGTTATATCAGAACATATCCATTATCAGACGC
GGATTTCGCGCTGTTGGTGATACTACCCACTCGCTTATTGCAACAGTGCCGAGAAGAGGATTCAAGATCCATAATGACAT
TAACATACAAAATCATGTAATAAACTCATCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGG
GATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTTATCTAATTATGTTG
AGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCAAGGATTACAA
GACTGTTGCGGAAATTAATGGCTGCCATTTTAATGTAACAGAAGATACAATTGATGGGTTGAAAGAGTTCGATAAATATA
AAACACGGATACTGGATTCGGGGATTAACTGCAAAAAATATCCGTGGTTATACTTCCCTCTTGCAAAATCCTCACCGGGG
ATGATTGTTATGGCATGCAATAAAAACTATAACCAACATGAAGTGGCAGGCTGTTTAACCCTGTCTTACCGTGAGGTTAA
TCGTGGTTGA

Upstream 100 bases:

>100_bases
CATGATAAATATAAAATTAATATATATTTATGCCGTAAATACCAATATACTTAGCAAACTATGTGATTTCCATTTCGATT
GATTTAGTGTTTATTGACGT

Downstream 100 bases:

>100_bases
TTATAAAAAAAAACTTATTATTTATTTTAGTTTTTATCAGTGGGTTTATTCTCTTCACTGTCTATTCTTACACTGCAGAA
AAAATGATATATAACGAAAC

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MYWIINDNIEFWPEHRKLISVHNADLNVVLTTPASRCLSLLLEAFPDVVAQQDFFTRVWEEEGMRVPTNTLYQNISIIRR
GFRAVGDTTHSLIATVPRRGFKIHNDINIQNHVINSSTDAHTHNAPPAIKVNAGYKESIGGAKNFNNKILKHIKSYLIML
SAFVIGAYSAYWLWNNNQPKPFFKDYKTVAEINGCHFNVTEDTIDGLKEFDKYKTRILDSGINCKKYPWLYFPLAKSSPG
MIVMACNKNYNQHEVAGCLTLSYREVNRG

Sequences:

>Translated_269_residues
MYWIINDNIEFWPEHRKLISVHNADLNVVLTTPASRCLSLLLEAFPDVVAQQDFFTRVWEEEGMRVPTNTLYQNISIIRR
GFRAVGDTTHSLIATVPRRGFKIHNDINIQNHVINSSTDAHTHNAPPAIKVNAGYKESIGGAKNFNNKILKHIKSYLIML
SAFVIGAYSAYWLWNNNQPKPFFKDYKTVAEINGCHFNVTEDTIDGLKEFDKYKTRILDSGINCKKYPWLYFPLAKSSPG
MIVMACNKNYNQHEVAGCLTLSYREVNRG
>Mature_269_residues
MYWIINDNIEFWPEHRKLISVHNADLNVVLTTPASRCLSLLLEAFPDVVAQQDFFTRVWEEEGMRVPTNTLYQNISIIRR
GFRAVGDTTHSLIATVPRRGFKIHNDINIQNHVINSSTDAHTHNAPPAIKVNAGYKESIGGAKNFNNKILKHIKSYLIML
SAFVIGAYSAYWLWNNNQPKPFFKDYKTVAEINGCHFNVTEDTIDGLKEFDKYKTRILDSGINCKKYPWLYFPLAKSSPG
MIVMACNKNYNQHEVAGCLTLSYREVNRG

Specific function: Unknown

COG id: COG3710

COG function: function code K; DNA-binding winged-HTH domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To V.cholerae cholera toxin transcriptional activator (toxR) [H]

Homologues:

Organism=Escherichia coli, GI1789213, Length=268, Percent_Identity=98.8805970149254, Blast_Score=555, Evalue=1e-159,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 30788; Mature: 30788

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYWIINDNIEFWPEHRKLISVHNADLNVVLTTPASRCLSLLLEAFPDVVAQQDFFTRVWE
CEEEECCCCEECCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEGMRVPTNTLYQNISIIRRGFRAVGDTTHSLIATVPRRGFKIHNDINIQNHVINSSTDA
HCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCHHEEECCCCCC
HTHNAPPAIKVNAGYKESIGGAKNFNNKILKHIKSYLIMLSAFVIGAYSAYWLWNNNQPK
CCCCCCCEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
PFFKDYKTVAEINGCHFNVTEDTIDGLKEFDKYKTRILDSGINCKKYPWLYFPLAKSSPG
CHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
MIVMACNKNYNQHEVAGCLTLSYREVNRG
EEEEEECCCCCHHHHHHEEEEEHHHCCCC
>Mature Secondary Structure
MYWIINDNIEFWPEHRKLISVHNADLNVVLTTPASRCLSLLLEAFPDVVAQQDFFTRVWE
CEEEECCCCEECCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEGMRVPTNTLYQNISIIRRGFRAVGDTTHSLIATVPRRGFKIHNDINIQNHVINSSTDA
HCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCHHEEECCCCCC
HTHNAPPAIKVNAGYKESIGGAKNFNNKILKHIKSYLIMLSAFVIGAYSAYWLWNNNQPK
CCCCCCCEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
PFFKDYKTVAEINGCHFNVTEDTIDGLKEFDKYKTRILDSGINCKKYPWLYFPLAKSSPG
CHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
MIVMACNKNYNQHEVAGCLTLSYREVNRG
EEEEEECCCCCHHHHHHEEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]