| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is yhiN [H]
Identifier: 209396835
GI number: 209396835
Start: 4473770
End: 4474972
Strand: Reverse
Name: yhiN [H]
Synonym: ECH74115_4838
Alternate gene names: 209396835
Gene position: 4474972-4473770 (Counterclockwise)
Preceding gene: 209398495
Following gene: 209399972
Centisome position: 80.31
GC content: 55.28
Gene sequence:
>1203_bases GTGGAAAGGTTTGATGCCATTATTATAGGCGCTGGTGCGGCGGGTATGTTCTGTTCTGCGCTGGCAGGTCAGGCAGGACG CCGGGTTCTGCTGATCGATAATGGTAAAAAACCAGGGCGCAAAATCCTTATGTCTGGCGGTGGGCGCTGCAACTTTACCA ACCTTTATGTCGAACCGGGCGCTTATCTGAGCCAGAATCCGCATTTTTGTAAGTCTGCACTCGCGCGTTTTACCCAGTGG GATTTCATTGATCTGGTCAATAAACACGGCATCGCCTGGCACGAGAAAACGTTAGGGCAACTCTTCTGCGATGACTCCGC GCAGCAGATTGTCGACATGCTGGTGGATGAGTGCGAGAAGGGCAATGTGACCGTCAGATTGCGTAGCGAAGTGCTGAGTG TGGCGAAGGATGATACAGGCTTCACGCTTGAACTGAACGGCATGACTGTCGGTTGTGAAAAGCTGGTCATCGCGACCGGC GGGCTGTCAATGCCGGGCCTGGGCGCGTCGCCGTTTGGTTATAAGATTGCCGAACAATTTGGCCTCAACGTGCTGCCGAC CCGCGCGGGTCTGGTGCCATTCACTCTGCATAAACCGTTGCTCGAAGAGTTACAGGTGCTGGCGGGCGTGGCGGTGCCTT CCGTGATTACCGCTGAAAACGGCACCGTTTTCCGTGAGAACTTACTCTTCACCCATCGCGGCTTGTCTGGACCGGCGGTG TTGCAAATTTCCAGCTACTGGCAACCGGGGGAATTTGTCAGTATCAATCTGCTACCGGATGTGGACCTCGAAACCTTCCT GAATGAGCAGCGTAACGCACATCCGAATCAGAGCCTGAAAAACACACTGGCGGTTCATCTACCGAAGCGGTTGGTTGAAC GCTTACAGCAACTCGGGCAAATCCCGGATGTTTCGCTAAAACAGCTCAACGTGCGTGACCAACAGGCACTGATTAGCACA TTGACCGACTGGCGCGTACAACCCAACGGCACTGAAGGCTATCGCACTGCCGAAGTGACGCTCGGCGGCGTGGACACCAA CGAACTCTCTTCACGGACGATGGAAGCGCGCAAAGTGCCTGGGCTGTACTTTATCGGCGAAGTGATGGACGTTACCGGCT GGCTGGGGGGCTATAACTTCCAGTGGGCGTGGTCGAGTGCGTGGGCTTGTGCGCAGGATTTGATTGCAGCGAAGTCGTGC TGA
Upstream 100 bases:
>100_bases TATAATTCAGGCAAATACTTCCTTTTAGTAATATTGATGCTGGTGCGACCACTGAGGAATCTTTACAATTCACGCCCGTT TTTTCTAAGAGGAGCGCAAC
Downstream 100 bases:
>100_bases GCTATTTTTCCTAAAGATGAAAATTATTAGAGTCGCATTAAAAATGAGCTAATTTTGATAGTGGCTATCTTGTGATTATT TTCTAATGAGCCCGTGAACT
Product: pyridine nucleotide-disulfide oxidoreductase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQW DFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVTVRLRSEVLSVAKDDTGFTLELNGMTVGCEKLVIATG GLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAV LQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALIST LTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKSC
Sequences:
>Translated_400_residues MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQW DFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVTVRLRSEVLSVAKDDTGFTLELNGMTVGCEKLVIATG GLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAV LQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALIST LTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKSC >Mature_400_residues MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQW DFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVTVRLRSEVLSVAKDDTGFTLELNGMTVGCEKLVIATG GLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAV LQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALIST LTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKSC
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=399, Percent_Identity=99.2481203007519, Blast_Score=818, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 43710; Mature: 43710
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPG CCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEEEECCC AYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEK CCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCEEHHHHHHHHHCCCHHHHHHHHHHHHCCC GNVTVRLRSEVLSVAKDDTGFTLELNGMTVGCEKLVIATGGLSMPGLGASPFGYKIAEQF CCEEEEEHHHHHHHHCCCCCEEEEECCEEECCEEEEEEECCCCCCCCCCCCCCHHHHHHH GLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAV CCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEECCEEEEECCCCCCEE LQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQ EEEECCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC IPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVP CCCCCHHHCCCHHHHHHHHHHHHCEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCC GLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKSC CEEEHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPG CCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEEEECCC AYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEK CCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCEEHHHHHHHHHCCCHHHHHHHHHHHHCCC GNVTVRLRSEVLSVAKDDTGFTLELNGMTVGCEKLVIATGGLSMPGLGASPFGYKIAEQF CCEEEEEHHHHHHHHCCCCCEEEEECCEEECCEEEEEEECCCCCCCCCCCCCCHHHHHHH GLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAV CCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEECCEEEEECCCCCCEE LQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQ EEEECCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC IPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVP CCCCCHHHCCCHHHHHHHHHHHHCEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCC GLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKSC CEEEHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]