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The map label for this gene is yqhH [H]

Identifier: 209396592

GI number: 209396592

Start: 4002060

End: 4002317

Strand: Direct

Name: yqhH [H]

Synonym: ECH74115_4326

Alternate gene names: 209396592

Gene position: 4002060-4002317 (Clockwise)

Preceding gene: 209397569

Following gene: 209398732

Centisome position: 71.82

GC content: 48.45

Gene sequence:

>258_bases
ATGAAAACGATTTTCACCGTGGGAGCTGTTGTTCTGGCAACCTGCGTGCTCAGTGGCTGCGTCAATGAGCAAAAGGTCAA
TCAGCTGGCGAGCAATGTGCAAACATTAAATGCCAAAATCGCCCGGCTTGAGCAGGATATGAAAGCACTACGCCCACAAA
TCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCACAGGACTATTTTGATTGCCTACGCTGCTTG
CGTATGTACGCAGAATGA

Upstream 100 bases:

>100_bases
CAGCCTACTTAAGCAGATTGAGGCAAAAACCGCCGCCAGATTAAAGCAATGAGCTGAATTAAATAGCAATTAGCCGGAAC
AATAAAAAAGGGAACACTAT

Downstream 100 bases:

>100_bases
TAAAAAAATCCCCGGCAGCATGTCAGTTGCCGGGGATTTTTTTTAACGTCCAACCGCCGCTTTAGGGCGTTTCTTCGCAC
CAGCATTCACCGGACGAGAT

Product: putative outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MKTIFTVGAVVLATCVLSGCVNEQKVNQLASNVQTLNAKIARLEQDMKALRPQIYAAKSEANRANTRLDAQDYFDCLRCL
RMYAE

Sequences:

>Translated_85_residues
MKTIFTVGAVVLATCVLSGCVNEQKVNQLASNVQTLNAKIARLEQDMKALRPQIYAAKSEANRANTRLDAQDYFDCLRCL
RMYAE
>Mature_85_residues
MKTIFTVGAVVLATCVLSGCVNEQKVNQLASNVQTLNAKIARLEQDMKALRPQIYAAKSEANRANTRLDAQDYFDCLRCL
RMYAE

Specific function: Unknown

COG id: COG4238

COG function: function code M; Murein lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789390, Length=85, Percent_Identity=98.8235294117647, Blast_Score=173, Evalue=2e-45,
Organism=Escherichia coli, GI1787967, Length=67, Percent_Identity=49.2537313432836, Blast_Score=72, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016367
- InterPro:   IPR023147 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9499; Mature: 9499

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIFTVGAVVLATCVLSGCVNEQKVNQLASNVQTLNAKIARLEQDMKALRPQIYAAKSE
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANRANTRLDAQDYFDCLRCLRMYAE
HHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTIFTVGAVVLATCVLSGCVNEQKVNQLASNVQTLNAKIARLEQDMKALRPQIYAAKSE
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANRANTRLDAQDYFDCLRCLRMYAE
HHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]