| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is csgG [H]
Identifier: 209396137
GI number: 209396137
Start: 1403577
End: 1404410
Strand: Reverse
Name: csgG [H]
Synonym: ECH74115_1416
Alternate gene names: 209396137
Gene position: 1404410-1403577 (Counterclockwise)
Preceding gene: 209398227
Following gene: 209397469
Centisome position: 25.2
GC content: 50.24
Gene sequence:
>834_bases ATGCAGCGCTTATTTCTTTTGGTTGCCGTCATGTTACTGAGCGGATGCTTAACCGCCCCGCCTAAAGAAGCCGCCAGACC GACATTAATGCCTCGTGCTCAGAGCTACAAAGATTTGACCCATCTGCCAGCGCCGACGGGTAAGATCTTTGTTTCGGTAT ACAACATTCAGGACGAAACCGGGCAATTTAAACCCTACCCGGCAAGTAACTTCTCCACTGCTGTTACGCAAAGCGCCACG GCGATGCTGGTCACGGCATTGAAAGATTCTCGCTGGTTTATACCGCTGGAGCGCCAGGGCTTACAAAACCTGCTTAATGA GCGCAAGATTATTCGTGCGGCACAAGAAAACGGCACGGTTGCCATTAATAACCGAATCCCGCTGCAATCTTTAACTGCGG CAAATATCATGGTTGAAGGTTCGATTATCGGTTATGAAAGCAATGTCAAATCTGGCGGGGTTGGGGCAAGATATTTTGGG ATCGGTGCCGACACGCAATACCAGCTCGATCAGATTGCCGTGAACCTGCGCGTCGTCAATGTGAGTACCGGTGAGATCCT CTCCTCGGTGAACACCAGTAAGACGATACTTTCCTATGAAGTTCAGGCCGGGGTTTTCCGCTTTATTGACTACCAGCGCT TGCTGGAAGGGGAAGTGGGTTACACCTCGAACGAACCCGTTATGCTGTGCCTGATGTCGGCTATCGAAACAGGGGTCATT TTCCTGATTAATGATGGTATTGACCGTGGTCTGTGGGATTTGCAGAACAAAGCAGAACGGCAGAATGACATTCTGGTGAA ATACCGCCATATGTCGGTTCCACCGGAATCCTGA
Upstream 100 bases:
>100_bases TGACAGATCGTAAAACCGGACAAACCTCGACCATCCAGGTTTCGGGTTTACAAAATAACTCAACCGATTTTTAAGCCCCA GCTTCATAAGGAAAATAATC
Downstream 100 bases:
>100_bases CAGATAAAAATGCCGGAATTAATAATCCGGCATTTACTGTTTAAGCGAAAGCGTGAGTGCCCCTCACGCTTTATTTTTGA TTTCCTGCTCACGGAGAGCC
Product: curli production assembly/transport subunit CsgG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MQRLFLLVAVMLLSGCLTAPPKEAARPTLMPRAQSYKDLTHLPAPTGKIFVSVYNIQDETGQFKPYPASNFSTAVTQSAT AMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTVAINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFG IGADTQYQLDQIAVNLRVVNVSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGEVGYTSNEPVMLCLMSAIETGVI FLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPES
Sequences:
>Translated_277_residues MQRLFLLVAVMLLSGCLTAPPKEAARPTLMPRAQSYKDLTHLPAPTGKIFVSVYNIQDETGQFKPYPASNFSTAVTQSAT AMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTVAINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFG IGADTQYQLDQIAVNLRVVNVSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGEVGYTSNEPVMLCLMSAIETGVI FLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPES >Mature_277_residues MQRLFLLVAVMLLSGCLTAPPKEAARPTLMPRAQSYKDLTHLPAPTGKIFVSVYNIQDETGQFKPYPASNFSTAVTQSAT AMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTVAINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFG IGADTQYQLDQIAVNLRVVNVSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGEVGYTSNEPVMLCLMSAIETGVI FLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPES
Specific function: May be involved in the biogenesis of curli organelles [H]
COG id: COG1462
COG function: function code M; Uncharacterized protein involved in formation of curli polymers
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CsgG family [H]
Homologues:
Organism=Escherichia coli, GI1787274, Length=277, Percent_Identity=99.6389891696751, Blast_Score=568, Evalue=1e-163,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005534 [H]
Pfam domain/function: PF03783 CsgG [H]
EC number: NA
Molecular weight: Translated: 30562; Mature: 30562
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLFLLVAVMLLSGCLTAPPKEAARPTLMPRAQSYKDLTHLPAPTGKIFVSVYNIQDET CHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEEECCCC GQFKPYPASNFSTAVTQSATAMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTV CCCCCCCCCCCCHHHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCE AINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFGIGADTQYQLDQIAVNLRVVN EECCCCCHHHHCEEEEEEECEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEEE VSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGEVGYTSNEPVMLCLMSAIETGVI ECHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEE FLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPES EEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCC >Mature Secondary Structure MQRLFLLVAVMLLSGCLTAPPKEAARPTLMPRAQSYKDLTHLPAPTGKIFVSVYNIQDET CHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEEECCCC GQFKPYPASNFSTAVTQSATAMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTV CCCCCCCCCCCCHHHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCE AINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFGIGADTQYQLDQIAVNLRVVN EECCCCCHHHHCEEEEEEECEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEEE VSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGEVGYTSNEPVMLCLMSAIETGVI ECHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEE FLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPES EEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA