| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is yeiR [H]
Identifier: 209395981
GI number: 209395981
Start: 3044120
End: 3045106
Strand: Direct
Name: yeiR [H]
Synonym: ECH74115_3311
Alternate gene names: 209395981
Gene position: 3044120-3045106 (Clockwise)
Preceding gene: 209396686
Following gene: 209399236
Centisome position: 54.63
GC content: 54.61
Gene sequence:
>987_bases GTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCAGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGA TCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGTCGGAATTGATGGTGCTTTGCTCGCCGATAGCGGCG CACTGCTGAAAGAGATCCCCGGCGGCTGCATGTGCTGCGTTAATGGTTTACCCATGCAGGTAGGGTTGAATACCTTACTG CGTCAGGGAAAACCAGACCGCTTGTTGATAGAGCCGACTGGGCTGGGCCATCCGAAACAGATCCTCGATCTGTTAACCGC ACCAGTCTATGAACCGTGGATAGATCTGCGCGCCACGTTGTGCATTCTCGATCCACGCCTGCTGCTGGACGAAAAAAGCG CCAGCAATGAAAACTTCCGTGACCAGCTGGCTGCCGCAGACATCATTGTCGCCAATAAATCCGACCGTGCGACACCTGAA AGCGAGCAAGCGCTACAGCGCTGGTGGCAGCAAAATGGTGGCGATCGGCAATTAATTCACAGTGAGCATGGGAAAGTTGC CGGTCATCTTCTGGATTTGCCGCGTCACAATTTAGCCGAGTTGCCCGCCAGCGCCGCGCATTCTCATCAGCATGTCGTGA AAAAAGGGTTAGCAGCGTTAAGCCTGCCAGAGCATCAACGCTGGCGTCGCAGTCTGAACAGTGGACAAGGACATCAGGCC TGCGGCTGGATATTCGACGCTGATACGGTATTCGACACCATTGGCATTCTGGAATGGGCGCGACTTGCACCGGTGGAACG CGTCAAAGGCGTGCTGCGTATTCCCGAAGGGCTGGTGCGAATCAACCGTCAGGGCGATGACCTGCACATTGAAACGCAAA ACGTTGCGCCACCGGACAGCCGTATTGAGCTGATTTCCAGCAGCGAAGCTGACTGGAATGCCTTGCAGAGCGCGCTGTTG AAGCTTCGTTTAGCGACTACCGCGTAA
Upstream 100 bases:
>100_bases GCGGATGAAGCTCGCCTTCGTCCGCTCTCCCCTTCTCTTTTCTGCCGTTTTTAGCCAGGATTAACGCTCAGTTAACTTAC CAGAGTATTGCGGAGCTGTT
Downstream 100 bases:
>100_bases GGTTGCCTGCGTTTTTCAGTAAGATAATTAGAGAAAATATGATTAAAAATTTGCCGCAAATAGTGTTGTTGAATATTGTC GGCCTCGCGCTGTTTCTTTC
Product: CobW/P47K family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGIDGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLL RQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPE SEQALQRWWQQNGGDRQLIHSEHGKVAGHLLDLPRHNLAELPASAAHSHQHVVKKGLAALSLPEHQRWRRSLNSGQGHQA CGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPEGLVRINRQGDDLHIETQNVAPPDSRIELISSSEADWNALQSALL KLRLATTA
Sequences:
>Translated_328_residues MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGIDGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLL RQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPE SEQALQRWWQQNGGDRQLIHSEHGKVAGHLLDLPRHNLAELPASAAHSHQHVVKKGLAALSLPEHQRWRRSLNSGQGHQA CGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPEGLVRINRQGDDLHIETQNVAPPDSRIELISSSEADWNALQSALL KLRLATTA >Mature_327_residues TRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGIDGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLLR QGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPES EQALQRWWQQNGGDRQLIHSEHGKVAGHLLDLPRHNLAELPASAAHSHQHVVKKGLAALSLPEHQRWRRSLNSGQGHQAC GWIFDADTVFDTIGILEWARLAPVERVKGVLRIPEGLVRINRQGDDLHIETQNVAPPDSRIELISSSEADWNALQSALLK LRLATTA
Specific function: Unknown
COG id: COG0523
COG function: function code R; Putative GTPases (G3E family)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cobW C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI126722884, Length=240, Percent_Identity=28.3333333333333, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI33469141, Length=240, Percent_Identity=28.3333333333333, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI223941779, Length=229, Percent_Identity=27.9475982532751, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI148727351, Length=240, Percent_Identity=28.3333333333333, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI146231952, Length=240, Percent_Identity=28.3333333333333, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI223941776, Length=233, Percent_Identity=27.4678111587983, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1788499, Length=328, Percent_Identity=98.780487804878, Blast_Score=655, Evalue=0.0, Organism=Escherichia coli, GI87082430, Length=176, Percent_Identity=32.3863636363636, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003495 - InterPro: IPR011629 [H]
Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]
EC number: NA
Molecular weight: Translated: 35995; Mature: 35863
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGIDGALLADSGALLKEIP CCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHCC GGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATL CCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHH CILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPESEQALQRWWQQNGGDRQLIH EEECCHHHCCCCCCCCCCHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHH SEHGKVAGHLLDLPRHNLAELPASAAHSHQHVVKKGLAALSLPEHQRWRRSLNSGQGHQA HCCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC CGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPEGLVRINRQGDDLHIETQNVAPPDS EEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHEEECCCCCEEEEEECCCCCCHH RIELISSSEADWNALQSALLKLRLATTA HEEEECCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGIDGALLADSGALLKEIP CCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHCC GGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATL CCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHH CILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPESEQALQRWWQQNGGDRQLIH EEECCHHHCCCCCCCCCCHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHH SEHGKVAGHLLDLPRHNLAELPASAAHSHQHVVKKGLAALSLPEHQRWRRSLNSGQGHQA HCCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC CGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPEGLVRINRQGDDLHIETQNVAPPDS EEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHEEECCCCCEEEEEECCCCCCHH RIELISSSEADWNALQSALLKLRLATTA HEEEECCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]