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The map label for this gene is ycfR [H]

Identifier: 209395944

GI number: 209395944

Start: 4222491

End: 4222805

Strand: Direct

Name: ycfR [H]

Synonym: ECH74115_4555

Alternate gene names: 209395944

Gene position: 4222491-4222805 (Clockwise)

Preceding gene: 209397870

Following gene: 209400033

Centisome position: 75.78

GC content: 47.3

Gene sequence:

>315_bases
ATGGGTCACGAAACAAAGGCCCAGCTAAAAGATTATGTCGAGGTAAAAATCATGAAAATCAAAACCACTGTTGCTGCATT
AAGCGTACTTTCTGTTCTCTCTTTCGGTGCATTCGCTGCCGACTCCATTGATGCTGCACAAGCACAAAATCGTGAAGCAA
TCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAA
GGCGCAACGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAA

Upstream 100 bases:

>100_bases
TTTTGTTATTAAAATTCACATTTTTAACACTTAGTATCAACTGAAACAGTTAGCGCGGTATTAATTAGCTCAATAATTAG
TGTATACTTGATTTTGTGAT

Downstream 100 bases:

>100_bases
ACCCTCATCGTCTTGTCCGACGATATTGCCCCCGGTTCGGGGGCTTTTTTTTGCGCTAATGACGAACATTAAAACGCAAA
TGCCCTTCCAGCTCTTCCTC

Product: protein YcfR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MGHETKAQLKDYVEVKIMKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKAEEK
GATAYQITEARSGDTWHATAELYK

Sequences:

>Translated_104_residues
MGHETKAQLKDYVEVKIMKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKAEEK
GATAYQITEARSGDTWHATAELYK
>Mature_103_residues
GHETKAQLKDYVEVKIMKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKAEEKG
ATAYQITEARSGDTWHATAELYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BhsA/McbA family [H]

Homologues:

Organism=Escherichia coli, GI87082233, Length=87, Percent_Identity=100, Blast_Score=176, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010854 [H]

Pfam domain/function: PF07338 DUF1471 [H]

EC number: NA

Molecular weight: Translated: 11168; Mature: 11037

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHETKAQLKDYVEVKIMKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEEC
GVASSPMDMREMLNKKAEEKGATAYQITEARSGDTWHATAELYK
CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHECCC
>Mature Secondary Structure 
GHETKAQLKDYVEVKIMKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEEC
GVASSPMDMREMLNKKAEEKGATAYQITEARSGDTWHATAELYK
CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]