| Definition | Helicobacter pylori G27, complete genome. |
|---|---|
| Accession | NC_011333 |
| Length | 1,652,982 |
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Identifier: 208434820
GI number:
Start: 936831
End: 939266
Strand: Reverse
Name: Not Available
Synonym: HPG27_866
Alternate gene names: NA
Gene position: NA
Preceding gene: 208434821
Following gene: 208434819
Centisome position: NA
GC content: NA
Gene sequence:
>2436_bases ATGAATGACAAGCGTTTTAGAAAGTATTGTAGTTTTTCTATTTTTTTGTCCTTATTAGGCATGTTTGAATTGGAGGCTAA AGAAGAAGAAAAAGAAGAAAAAAAGACAGAAAGAAAAAAAGAAAAGAACGCCCAACACACTCTGGGTAAGGTTACCACTC AAGCGGCTAAAATCTTTAATTACAACAACCAGACAACCATTTCAAGTAAGGAATTAGAAAGAAGGCAAGCCAACCAGATC AGCGACATGTTTAGAAGAAACCCTAATATCAATGTGGGCGGTGGTGCGGTGATAGCGCAAAAAATTTATGTGCGCGGTAT TGAAGACAGATTGGCTCGGGTTACGGTGGATGGCGCGGCGCAAATGGGTGCAAGCTATGGGCATCAAGGCAATACGATTA TTGACCCTGGAATGCTCAAAAGCGTGGTGGTTACTAAGGGGGCGGCTCAAGCGAGTGCTGGGCCTATGGCTTTGATTGGT GCGATCAAAATGGAGACTAAAAGCGCGAGCGATTTTATCCCTAAAGGTAAAGACTACGCCATAAGTGGGGCTGCAACTTT TTTGACCAACTTTGGGGACAGGGAAACCGTGATGGGCGCTTATCGTAACCATCATTTTGATATGCTTTTGTATTACACGC ACCAAAATATTTTTTATTATCGTGATGGGGATAATGCGATGAAAAATCTTTTTGATCCTAAAGCAAATAATAAAGTTACA GGAAGTCCTAGCGAGCAAAACAATGTGATGGCTAAGATCAATGGTTATTTGAGCGAAAGGGACACCTTAACGCTCAGTTA TAACATGACTAGAGATAACGCTAATCGCCCTTTAAGAGCGAATTTTACAGGCACTTTTTTACCCTATTCTTGCGGTGATT TCAACGCTTTCCCTAACGAGAAAAACCCTAGCGATTGTTTGTTTGAAAATGACGCCAGTTTGTTTAAAACTTATAGCGTC AATTTAGTGCATAATGTGAGCTTGAATTATGAAAGAGAAGGGGGGAGCCGTTTTGGTGATCCTAAATTAAAAATCAATGG TTATACAAGCATTAGGAATGTCCAAATTGATCCGCTTTTTAAGCCTAACGATATAGCGGCTATCATTCCTTTCACCCCAA ACCCCAAACTTGGCGAAGAAAATGAATGCGTGGCGCAAGGGGGCATTTATGACGCTCTTAAACAAACTTGCTCCATCACT TTTAAAAGCCTTGGAGGGGGTTCTGTGGTGGCTAATAAAAATTTATTCATCATCAATTCCGGGTTCAATGCGAATGTGAT CCACACCATAGATCATAAAAATGACAATCTTTTGGAATACGGGTTGAATTACCAAAACTTAACCACTTTTGATAAAGCGA TCCCTAATAGCGAATTAGTCAAACCCGGCGATGCCCCTGACGCATGCTTAAGGGTTACAAGCCCTAATGATCCCAACATG AACGGGCGTTGCCAACGAAATGGCGCTACGGCGAATGTGGTTGGGGTGTATGCGCAAGCGAATTACACCTTGCACCCTAT GGTAACTTTAGGGGCAGGGACTCGTTACGATGTTTATACTTTAGTGGATAAAGACTGGCAATTGCACATAACCCAAGGGT TTAGCCCTAGCGCGGCTTTAAATGTCTCGCCTTTAGAAAATTTGAATTTCAGGCTTTCTTACGCGTATGTAACCAGAGGC CCTATGCCTGGAGGTTTGGTGTGGATGCGTCAAGATAATTTGCGCTACAACCGCAATTTAAAGCCAGAAATTGGGCAAAA TGCGGAATTTAACACCGAATACAGCAGTCAGTATTTTGATTTCAGAGCTGCCGGTTTTGTCCAATTGATTTCTAATTACA TCAATCAATTTTCTTCAACGCTTTTTGTAACCAACTTGCCCGTGCAAGATATTATTTATGTGCCTGGTTATGAAGTTTCA GGGACGGCTAAATACAAGGGCTTTTCTTTAGGCTTGAGCGTGGCGCGATCATGGCCTTCTTTAAAGGGGCGTTTGATCGC TGATGTGTATGAATTGGCTGCCACGACCGGCAATGTGTTTATTTTAACGGCAAGCTATACAATCCCACGCACCGGCCTTA GCATCACTTGGATTTCACGATTCGTTACGGATTTGAGTTATTGCTCTTATAGCCCTTATCGTAACGGCCCTACGGATATT GACAGACGGCCTAGCAATTGCCCTAAAACGCCCGGGATTTTTCATGTGCATAAGCCGGGTTATGGGGTGAGCAGTTTTTT TATCACTTACAAGCCCACTTACAAAAAACTCAAAGGGTTGAGCCTGAATGCGGTGTTTAACAATATTTTTAACCAACAAT ATATTGATCAAGCAAGCCCGGTGATGAGCCCTGATGAACCCAATCAAGACAAATACGCAAGGGGCATGGCAGAGCCTGGC TTTAACGCTAGATTTGAAATTTCTTATAAGTTTTAA
Upstream 100 bases:
>100_bases AAAAATGGCTAGCTCTTTTAAGGTGATTGTAATATTTTTTTGATTATAATAACACCTTTATTTTTTAAGAGAAATTATTA TCATATTTAGGATTTTAAGA
Downstream 100 bases:
>100_bases TAATGGAGCTAAAAATGAGGATTTCATGCGTAATAAGCCCAATCAAAAATAACTCATTCTTTAAAAGTAACAAATATATG ATTTTAATCCTTTAATTTTA
Product: iron-regulated outer membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>811_residues MNDKRFRKYCSFSIFLSLLGMFELEAKEEEKEEKKTERKKEKNAQHTLGKVTTQAAKIFNYNNQTTISSKELERRQANQI SDMFRRNPNINVGGGAVIAQKIYVRGIEDRLARVTVDGAAQMGASYGHQGNTIIDPGMLKSVVVTKGAAQASAGPMALIG AIKMETKSASDFIPKGKDYAISGAATFLTNFGDRETVMGAYRNHHFDMLLYYTHQNIFYYRDGDNAMKNLFDPKANNKVT GSPSEQNNVMAKINGYLSERDTLTLSYNMTRDNANRPLRANFTGTFLPYSCGDFNAFPNEKNPSDCLFENDASLFKTYSV NLVHNVSLNYEREGGSRFGDPKLKINGYTSIRNVQIDPLFKPNDIAAIIPFTPNPKLGEENECVAQGGIYDALKQTCSIT FKSLGGGSVVANKNLFIINSGFNANVIHTIDHKNDNLLEYGLNYQNLTTFDKAIPNSELVKPGDAPDACLRVTSPNDPNM NGRCQRNGATANVVGVYAQANYTLHPMVTLGAGTRYDVYTLVDKDWQLHITQGFSPSAALNVSPLENLNFRLSYAYVTRG PMPGGLVWMRQDNLRYNRNLKPEIGQNAEFNTEYSSQYFDFRAAGFVQLISNYINQFSSTLFVTNLPVQDIIYVPGYEVS GTAKYKGFSLGLSVARSWPSLKGRLIADVYELAATTGNVFILTASYTIPRTGLSITWISRFVTDLSYCSYSPYRNGPTDI DRRPSNCPKTPGIFHVHKPGYGVSSFFITYKPTYKKLKGLSLNAVFNNIFNQQYIDQASPVMSPDEPNQDKYARGMAEPG FNARFEISYKF
Sequences:
NA
Specific function: NA
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA