Definition Helicobacter pylori G27, complete genome.
Accession NC_011333
Length 1,652,982

Click here to switch to the map view.

The map label for this gene is hopD

Identifier: 208433998

GI number:

Start: 23157

End: 25289

Strand: Reverse

Name: hopD

Synonym: HPG27_22

Alternate gene names: NA

Gene position: NA

Preceding gene: 208433999

Following gene: 208433997

Centisome position: NA

GC content: NA

Gene sequence:

>2133_bases
ATGAAGAAAAAATTTCTGTCATTAACCTTAGGTTCGCTTTTAGTTTCCGCTTTAAGCGCTGAAGACAACGGCTTTTTTGT
GAGTGCGGGCTATCAAATCGGTGAATCCTCTCAAATGGTGAAAAACACTAAAGGCATTCAAGAACTCTCAGATAGCTATG
AAAGATTGAACAATCTTTTAACGAATTATAGCGTCCTAAACACTCTCATCAGGCAGTCCGCCGACCCTAACGCTATCAAT
AACGCAAGGGGCAATTTGAACGCGAGCGCAAAGAATTTAATCAATGATAAAAAGAATTCCCCGGCGTATCAAGCGGTGCT
TTTAGCCTTAAACGCGGCAGCGGGGTTGTGGCAAGTCATGAGCTATGCGATTAGCGTTTGTGGCCCTGGCTCTGACAAAA
GTAAAAATGGGGGCGTTCAAACTTTTGAAAATGTGCCATCAAATGGAGGGACTACCATTACTTGCGATTCATTTTATGAA
CCAGGAAAGTGGAGCGCTATATCCACTGAAAATTACGCGAAAATCAATAAAGCCTATCAAATCATCCAAAAGGCTTTTGG
GAGCAGCGGGCAAGATATTCCTGCCTTAAGCGACACCAAAGAACTTAATTTTGAAATTAAAGGGAAAAAAAATGATAGCG
TCCAGCCAGGAGAAAGATGGAAATTCCCATGGACTAATGGATTTGTTTCAATCAAGTGGGTGAATGGGACTTATACAGAA
ACTAAAGAAGACATCAAAGTGTCCAACAACGCTCAAGAGCTTTTAAAACAGGCTAGCACTATTTTAACCACTCTTAATGA
AGCATGCCCATGGTTGAGTAATGGAGGTGCAGGCGGTGCAGGCGGTGGCAATAGTTTATGGGCCGGAATAGATAAAGGCG
ATGGGAGCGCGTGCGGGATTTTTAAAAATGAAATCAGCGCGATTCAAGACATGATCAAAAACGCTGAAATAGCCGTAGAG
CAATCCAAAATCGTTGCCGCCAACGCGCAAAACCAGCACAACCTAGACACCGGGAAGACATTCAACCCCTATAAAGACGC
CAACTTCGCCCAAAGCATGTTCGCTAACGCTAGAGCGCAAGCGGAGATTTTAAACCGTGCTCAAGCAGTGGTGAAGGATT
TTGAAAGAATCCCTGCAGCGTTCGTGAAAGACTCTTTAGGAGTGTGCCATGAAAAGGGTAGCGACGGCAATCTCCGTGGC
ACGCCATCTGGCACGGTTACTTCTAACACTTGGGGAGCCGGTTGCACGTATGTGGGAGAGACCGTAACGAATCTAAAAAA
CAGCATCGCTCATTTTGGCGACCAAGCCGAGCAAATCCATAACGCGCGAAACCTCGCCTACACTTTAGCGAACTTCAGCG
GTCAGTATAAAAAGCTAGGCGAACATTATGACAGCATCACAGCAGCGCTCTCAAGCTTGCCTGACGCTCAATCTTTACAA
AATGTGGTGAGCAAAAAGACTAACCCTAACAGCCCGCAAGGCATACAGGATAACTACTATATTGACTCCAACATCCATTC
TCAAGTGCAATCTAGGACTCAAGAACTCGGCAGTAACCCTTTCAGACGCGCTGGGCTAATCGCCGCTTCTACCACCAATA
ACGGCGCGATGAATGGGATCGGCTTTCAAGTGGGCTATAAGCAATTCTTTGGGGAAAAGAAATGGTGGGGCTTAAGATAC
TACGGCTTTGTGGATTACAACCACACCTATAACAAATCCCAATTTTTCAACGCTTCTTCTGATGTTTGGACTTATGGCGT
GGGGAGCGATTTGTTAGTGAATTTCATCAACGATAAAGCCACTAAACACAATAAGATTTCTTTTGGTGCGTTTGGCGGCA
TCCAACTAGCCGGGACTTCATGGCTTAATTCTCAATTCGTGAATTTAGCGAATGTGAACAATTACTATAAAGCTAAAATC
AACACCTCCAACTTCCAATTCTTATTCAATCTGGGCTTAAGGACCAATCTCGCCAGAAATAAGAGAAGAGGCGCTGAACA
TAGCGCGCAACATGGCATGGAATTAGGCGTGAAGATCCCCACGATCAACACGAATTACTATTCTTTGCTAGGCACTACCT
TGCAATACAGAAGGCTTTATAGCGTGTATCTCAACTATGTGTTTGCTTACTAA

Upstream 100 bases:

>100_bases
ATATTAACGAAATCTTGCTGTATGGTCTTACTTAAAGACACACTTCCGCAAGATCTGACGGATAAAATCAATCTTATTTC
AAGTAATAAAAGGAGAAAAC

Downstream 100 bases:

>100_bases
AAGCTTAAAACTCCCTTTTTAAGGGGTTTCTTTTTTGAACCCTCTCTTTTTTAGGGGGTTTAATCCTTTTAACTGACTTC
TCACTCGCTTTTTAACTTTT

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>710_residues
MKKKFLSLTLGSLLVSALSAEDNGFFVSAGYQIGESSQMVKNTKGIQELSDSYERLNNLLTNYSVLNTLIRQSADPNAIN
NARGNLNASAKNLINDKKNSPAYQAVLLALNAAAGLWQVMSYAISVCGPGSDKSKNGGVQTFENVPSNGGTTITCDSFYE
PGKWSAISTENYAKINKAYQIIQKAFGSSGQDIPALSDTKELNFEIKGKKNDSVQPGERWKFPWTNGFVSIKWVNGTYTE
TKEDIKVSNNAQELLKQASTILTTLNEACPWLSNGGAGGAGGGNSLWAGIDKGDGSACGIFKNEISAIQDMIKNAEIAVE
QSKIVAANAQNQHNLDTGKTFNPYKDANFAQSMFANARAQAEILNRAQAVVKDFERIPAAFVKDSLGVCHEKGSDGNLRG
TPSGTVTSNTWGAGCTYVGETVTNLKNSIAHFGDQAEQIHNARNLAYTLANFSGQYKKLGEHYDSITAALSSLPDAQSLQ
NVVSKKTNPNSPQGIQDNYYIDSNIHSQVQSRTQELGSNPFRRAGLIAASTTNNGAMNGIGFQVGYKQFFGEKKWWGLRY
YGFVDYNHTYNKSQFFNASSDVWTYGVGSDLLVNFINDKATKHNKISFGAFGGIQLAGTSWLNSQFVNLANVNNYYKAKI
NTSNFQFLFNLGLRTNLARNKRRGAEHSAQHGMELGVKIPTINTNYYSLLGTTLQYRRLYSVYLNYVFAY

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA