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The map label for this gene is sopA [C]

Identifier: 209696452

GI number: 209696452

Start: 3321723

End: 3322520

Strand: Reverse

Name: sopA [C]

Synonym: VSAL_I3068

Alternate gene names: 209696452

Gene position: 3322520-3321723 (Counterclockwise)

Preceding gene: 209696453

Following gene: 209696451

Centisome position: 99.92

GC content: 40.35

Gene sequence:

>798_bases
GTGGGAAGAGTTATCTCTATTGCGAACCAAAAAGGTGGCGTAGGCAAAACAACAACGGCGGTGAACCTTGCCGCTTCAAT
GGCTGCAACAAATCGTAAAGTATTACTGATTGACTTAGATGCTCAAGGTAATGCTACTATGGCCAGTGGCGTAGATAAAT
ACGACGTAGATGCAACGGCTTATGAGTTGTTGGTTGATGAAGTGCCTTTTGATAAGGTAGTTATAGAAGAAACCTCTGGT
GGTTATGATCTCATAGCCGCTAATGGTGACATTACAGCTGCTGAAATTAAATTGATGGAAGTGTTTGCGCGTGAAGTTCG
TTTACGCAATATGATCTACCCAGTTCGTGGTAACTATGATTTCATCTTTATTGATTGCCCTCCTGCATTAAATCTCCTTA
CAATTAACGCCATGGCTGCGTCCGATTCTGTATTAGTCCCTATGCAATGTGAATATTATGCACTAGAGGGGCTAACCGCA
TTAATTGACACTATTAGTAAATTAGCGGCAGTAGTTAATGCAGATTTGAAAATTGAAGGTCTACTTAGAACCATGTATGA
CCCTCGAAATCGATTAGCTAATGATGTGTCTGATCAACTTAAAAAACATTTCGGAGATAAAGTGTATCGCACTGTTATTC
CTCGTAATGTTCGATTAGCGGAAGCGCCAAGTCATGGTAAACCTGCAATGTATTATGATAAATACTCAAATGGTGCAAAA
GCATATCTTGCTCTTGCCGGAGAGATAATCCGCCGTGACGAACTGGAAAAAGAAAGGGAAACAAAAATTCATGAGTAA

Upstream 100 bases:

>100_bases
GTGTTCAGTCAGAGATGTAGTGACATTGATCGTTCCGGAGTTAGAGGGTGAAAGACACTTAGTCACCTTAACCGGAAAAA
AATAATGGAATGAGGTTAAT

Downstream 100 bases:

>100_bases
TAAACGTGGTTTAGGGAAAGGACTTGATGCGCTATTAGCGACAAGCTCATTAGCTCGTGAAAAGCAGACTGCCGCTGTTC
AAAGTGAGTCATTAGCAAAA

Product: chromosome partitioning protein, sporulation initiation inhibitor protein Soj

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MGRVISIANQKGGVGKTTTAVNLAASMAATNRKVLLIDLDAQGNATMASGVDKYDVDATAYELLVDEVPFDKVVIEETSG
GYDLIAANGDITAAEIKLMEVFAREVRLRNMIYPVRGNYDFIFIDCPPALNLLTINAMAASDSVLVPMQCEYYALEGLTA
LIDTISKLAAVVNADLKIEGLLRTMYDPRNRLANDVSDQLKKHFGDKVYRTVIPRNVRLAEAPSHGKPAMYYDKYSNGAK
AYLALAGEIIRRDELEKERETKIHE

Sequences:

>Translated_265_residues
MGRVISIANQKGGVGKTTTAVNLAASMAATNRKVLLIDLDAQGNATMASGVDKYDVDATAYELLVDEVPFDKVVIEETSG
GYDLIAANGDITAAEIKLMEVFAREVRLRNMIYPVRGNYDFIFIDCPPALNLLTINAMAASDSVLVPMQCEYYALEGLTA
LIDTISKLAAVVNADLKIEGLLRTMYDPRNRLANDVSDQLKKHFGDKVYRTVIPRNVRLAEAPSHGKPAMYYDKYSNGAK
AYLALAGEIIRRDELEKERETKIHE
>Mature_264_residues
GRVISIANQKGGVGKTTTAVNLAASMAATNRKVLLIDLDAQGNATMASGVDKYDVDATAYELLVDEVPFDKVVIEETSGG
YDLIAANGDITAAEIKLMEVFAREVRLRNMIYPVRGNYDFIFIDCPPALNLLTINAMAASDSVLVPMQCEYYALEGLTAL
IDTISKLAAVVNADLKIEGLLRTMYDPRNRLANDVSDQLKKHFGDKVYRTVIPRNVRLAEAPSHGKPAMYYDKYSNGAKA
YLALAGEIIRRDELEKERETKIHE

Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis soj [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 29154; Mature: 29023

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRVISIANQKGGVGKTTTAVNLAASMAATNRKVLLIDLDAQGNATMASGVDKYDVDATA
CCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHCCCCCCCCCHHH
YELLVDEVPFDKVVIEETSGGYDLIAANGDITAAEIKLMEVFAREVRLRNMIYPVRGNYD
HHHHHHCCCCCEEEEEECCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHCEEEECCCEE
FIFIDCPPALNLLTINAMAASDSVLVPMQCEYYALEGLTALIDTISKLAAVVNADLKIEG
EEEEECCCCCEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LLRTMYDPRNRLANDVSDQLKKHFGDKVYRTVIPRNVRLAEAPSHGKPAMYYDKYSNGAK
HHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCCCCCCCCEEEECCCCCCH
AYLALAGEIIRRDELEKERETKIHE
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GRVISIANQKGGVGKTTTAVNLAASMAATNRKVLLIDLDAQGNATMASGVDKYDVDATA
CCEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHCCCCCCCCCHHH
YELLVDEVPFDKVVIEETSGGYDLIAANGDITAAEIKLMEVFAREVRLRNMIYPVRGNYD
HHHHHHCCCCCEEEEEECCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHCEEEECCCEE
FIFIDCPPALNLLTINAMAASDSVLVPMQCEYYALEGLTALIDTISKLAAVVNADLKIEG
EEEEECCCCCEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LLRTMYDPRNRLANDVSDQLKKHFGDKVYRTVIPRNVRLAEAPSHGKPAMYYDKYSNGAK
HHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCCCCCCCCEEEECCCCCCH
AYLALAGEIIRRDELEKERETKIHE
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]