The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209696415

Identifier: 209696415

GI number: 209696415

Start: 3275710

End: 3276993

Strand: Direct

Name: 209696415

Synonym: VSAL_I3025

Alternate gene names: NA

Gene position: 3275710-3276993 (Clockwise)

Preceding gene: 209696414

Following gene: 209696416

Centisome position: 98.51

GC content: 25.0

Gene sequence:

>1284_bases
ATGAGTTTTTTTTTCAGAGTACTTGGCTATATTTTTATAAGTTTATTGTTTTTTTTGTACTTTTTAAATTTAAGCGATAT
AGCATCAAGCAGTAAGTTAACTCTTATAATAAGTTATTTTTCAATGAATTTAATTATTATTGTTAGCTTTCTTATTTATA
AAAAACTTTTCAATCCAATAATATTTGTTTTACCATTTTTATTTGGTTTTTTCTACTATCAATTTAACTTATCATATCGT
CAAAATGACCTTTCACTAGAAACTTATATTGTTATTTTTGTGTTTTTTATAGCATATTTTTCAGGTTGTATTTTTTCAAG
TAAGGCCAAATGTATTTCTTATGATGCAAGCGTTTCGTATAGTGTTGTGCATTTATTTTTTACTCTCGGTGTCATTATTT
TTGTAGTTGAGACCTTTTTAAGTGGTGGCTTTTCAGTAGTTAAAACACTACAAGGTTCAAATGCCTACATAGATAAAATT
AATTTACCAATTCTTCATTATTTCTACATGTTGTTAGCTATACTTCCTAGTTGCTATTACTACCTATATAAAAAAGGAAA
CATAAGGAAGTATATTTGCATTGGTTATATTCTATTCTGTACATTAATGATATTTGATTCTTTATCAAGACAATTGATTT
TATTATTAATATTTTCTTTATTTTTTACCTATATTAGATTTAATGATTTATCGATAGACAAGCAATTCTTCAAACTGACT
ATTTCTATAAGTATTTTGTTTATTATTATCGGTTCTTTGAGATATCTAGGCGGCGGTACATCAGATGTCAATGAGTTGGA
GTTTATGAAAGCTTATGCTAAAATAAACAAGGAATTTGATGTAAATATATTTGATGTTACTTTTAATCTGTATACAGCGA
CAAATTTTTCTACGTTAAATGACATGATTTTACTAAATGATAATGAGTTACATTTTGGTAAATATTTATTGCAAGCGTAT
ATAAAAATATTTAAATACAATGAAGCTTTCGATATAGAGTATAACCCACTTTTAGACTCTTATAGCTTACTGGGAACTAT
AATTGCGGATTTATATTTAGACTTTGGAGTTTTTGGTGTTGCTATTATTTCATTTTTATATGGTATTTTAGCTGATTATA
GTTATAGATCATATATAAACTCAAAAAGTTTATCTTCTAGCTTGCTAATAAGTGTTGTGTTTTACTCACTATTTATGAGT
CCATTTACAAATTACTTCAATCAATTATTTGTCCTTCTTTGTTTTCTTTTTTCAATGAAGTTTAGATATGTATTTAAATT
TTAA

Upstream 100 bases:

>100_bases
CTTTGCGAAGGGATCAACTTTTAGAATCATTTATTGCTATGGAAGGCAATTTAAAAATAGAGTTAAAAATTATTTTACTA
AACCTAATTTCAGGTGAACT

Downstream 100 bases:

>100_bases
ACAGGTTGGTATGTATAATAACATTTTAATTTCAGTTGTTGTTTTTAATAAATCCATTGCGGATATTCCAATTATATTTG
AGTTGTTATCAAGTGATATC

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MSFFFRVLGYIFISLLFFLYFLNLSDIASSSKLTLIISYFSMNLIIIVSFLIYKKLFNPIIFVLPFLFGFFYYQFNLSYR
QNDLSLETYIVIFVFFIAYFSGCIFSSKAKCISYDASVSYSVVHLFFTLGVIIFVVETFLSGGFSVVKTLQGSNAYIDKI
NLPILHYFYMLLAILPSCYYYLYKKGNIRKYICIGYILFCTLMIFDSLSRQLILLLIFSLFFTYIRFNDLSIDKQFFKLT
ISISILFIIIGSLRYLGGGTSDVNELEFMKAYAKINKEFDVNIFDVTFNLYTATNFSTLNDMILLNDNELHFGKYLLQAY
IKIFKYNEAFDIEYNPLLDSYSLLGTIIADLYLDFGVFGVAIISFLYGILADYSYRSYINSKSLSSSLLISVVFYSLFMS
PFTNYFNQLFVLLCFLFSMKFRYVFKF

Sequences:

>Translated_427_residues
MSFFFRVLGYIFISLLFFLYFLNLSDIASSSKLTLIISYFSMNLIIIVSFLIYKKLFNPIIFVLPFLFGFFYYQFNLSYR
QNDLSLETYIVIFVFFIAYFSGCIFSSKAKCISYDASVSYSVVHLFFTLGVIIFVVETFLSGGFSVVKTLQGSNAYIDKI
NLPILHYFYMLLAILPSCYYYLYKKGNIRKYICIGYILFCTLMIFDSLSRQLILLLIFSLFFTYIRFNDLSIDKQFFKLT
ISISILFIIIGSLRYLGGGTSDVNELEFMKAYAKINKEFDVNIFDVTFNLYTATNFSTLNDMILLNDNELHFGKYLLQAY
IKIFKYNEAFDIEYNPLLDSYSLLGTIIADLYLDFGVFGVAIISFLYGILADYSYRSYINSKSLSSSLLISVVFYSLFMS
PFTNYFNQLFVLLCFLFSMKFRYVFKF
>Mature_426_residues
SFFFRVLGYIFISLLFFLYFLNLSDIASSSKLTLIISYFSMNLIIIVSFLIYKKLFNPIIFVLPFLFGFFYYQFNLSYRQ
NDLSLETYIVIFVFFIAYFSGCIFSSKAKCISYDASVSYSVVHLFFTLGVIIFVVETFLSGGFSVVKTLQGSNAYIDKIN
LPILHYFYMLLAILPSCYYYLYKKGNIRKYICIGYILFCTLMIFDSLSRQLILLLIFSLFFTYIRFNDLSIDKQFFKLTI
SISILFIIIGSLRYLGGGTSDVNELEFMKAYAKINKEFDVNIFDVTFNLYTATNFSTLNDMILLNDNELHFGKYLLQAYI
KIFKYNEAFDIEYNPLLDSYSLLGTIIADLYLDFGVFGVAIISFLYGILADYSYRSYINSKSLSSSLLISVVFYSLFMSP
FTNYFNQLFVLLCFLFSMKFRYVFKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49870; Mature: 49739

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCC
>Mature Secondary Structure 
SFFFRVLGYIFISLLFFLYFLNLSDIASSSKLTLIISYFSMNLIIIVSFLIYKKLFNPI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
IFVLPFLFGFFYYQFNLSYRQNDLSLETYIVIFVFFIAYFSGCIFSSKAKCISYDASVSY
HHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHH
SVVHLFFTLGVIIFVVETFLSGGFSVVKTLQGSNAYIDKINLPILHYFYMLLAILPSCYY
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHH
YLYKKGNIRKYICIGYILFCTLMIFDSLSRQLILLLIFSLFFTYIRFNDLSIDKQFFKLT
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
ISISILFIIIGSLRYLGGGTSDVNELEFMKAYAKINKEFDVNIFDVTFNLYTATNFSTLN
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCC
DMILLNDNELHFGKYLLQAYIKIFKYNEAFDIEYNPLLDSYSLLGTIIADLYLDFGVFGV
CEEEECCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AIISFLYGILADYSYRSYINSKSLSSSLLISVVFYSLFMSPFTNYFNQLFVLLCFLFSMK
HHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRYVFKF
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA