The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

Click here to switch to the map view.

The map label for this gene is 209696408

Identifier: 209696408

GI number: 209696408

Start: 3266267

End: 3267163

Strand: Direct

Name: 209696408

Synonym: VSAL_I3015

Alternate gene names: NA

Gene position: 3266267-3267163 (Clockwise)

Preceding gene: 209696407

Following gene: 209696409

Centisome position: 98.23

GC content: 28.99

Gene sequence:

>897_bases
ATGATTAATATTGAACTAAACCCAATAGTTAACCTAGAAACGTTTGATTCAATAAATAGAAGCGTTGGTCTAAGTGGTTT
TATTCGGGCCAAAAATGAAGGTGAATATATTTATCAAGTTATCAGTTCTTGGATTGATTTACTTGATGAATTAATTGTTG
TTTTTAATGATTGTTCAGATAATACTGAATATGAAATAAAAAGAGCAATTAATGATTTTGGTGGTAAAGTAAAAGCTTTT
AAATATTTACCTAAAGTATTTGCTCAAGGTTCAAAAGAGCATGTTGAATTACCACATGATAATGTACATAGTTTGGTTCA
TTATTACAATTACGCATTATCAAAAACGACATGTAAGTATGCGGTGAAGATTGATGGTGATATAATCTATGATACTTCTG
CGACAGATATAATTCGTTCTTACCTAGCTAACTCATCTGAGACTGATTACTTTAAATTACATGGTGTTAATTTAATTGAT
AATCACGGTGAGTTATTTATACCTTCAAATTCTATATTTTGTGGTATGAATGGTGATTTATGTATATTCCCCGTAAGTAA
AAACAATATATTCAAATGGAAAAAAGAATTCGAGTTTTTAGATCTGTCTGGATTAAGTGATGCCGGTGGAGTGTTTGCTT
ATTACCATATGAAATTTATTAAAAAAGACATGGGTTTTAGTAACTATTTGCTAAAGGACAACCCCCAGAGTCGCTACGTG
AAGATAACAAAAGAATTTATAATACGTTTGCGTTTTTTAAGCATTGAACGAACATTAAATAAATTCAATATAACTTTGAA
ATTACCGAACACATTAAGAATTAAAGCAAAAAGAAAACGTGATTTCAAAAAAGATTATAAAGATGAATTGTGGAATTGTG
GAATTGTGGAATTGTAA

Upstream 100 bases:

>100_bases
GGTGTTGCTATGGCCTTTACTTTATCTAAGTTAATACACTTTATAATGACATTTTATATTTCTAATAATGCTTACAAAAT
GCCTTGGGGATTAAAAATAA

Downstream 100 bases:

>100_bases
TTAGCAGTCGTGATGTTGCTACCTATCTTGTCATGAAAATAGTACGAAATATGAAATCTAGATTAGTTAGTGTTGTAAAA
AAGATAACTAGTTAAAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MINIELNPIVNLETFDSINRSVGLSGFIRAKNEGEYIYQVISSWIDLLDELIVVFNDCSDNTEYEIKRAINDFGGKVKAF
KYLPKVFAQGSKEHVELPHDNVHSLVHYYNYALSKTTCKYAVKIDGDIIYDTSATDIIRSYLANSSETDYFKLHGVNLID
NHGELFIPSNSIFCGMNGDLCIFPVSKNNIFKWKKEFEFLDLSGLSDAGGVFAYYHMKFIKKDMGFSNYLLKDNPQSRYV
KITKEFIIRLRFLSIERTLNKFNITLKLPNTLRIKAKRKRDFKKDYKDELWNCGIVEL

Sequences:

>Translated_298_residues
MINIELNPIVNLETFDSINRSVGLSGFIRAKNEGEYIYQVISSWIDLLDELIVVFNDCSDNTEYEIKRAINDFGGKVKAF
KYLPKVFAQGSKEHVELPHDNVHSLVHYYNYALSKTTCKYAVKIDGDIIYDTSATDIIRSYLANSSETDYFKLHGVNLID
NHGELFIPSNSIFCGMNGDLCIFPVSKNNIFKWKKEFEFLDLSGLSDAGGVFAYYHMKFIKKDMGFSNYLLKDNPQSRYV
KITKEFIIRLRFLSIERTLNKFNITLKLPNTLRIKAKRKRDFKKDYKDELWNCGIVEL
>Mature_298_residues
MINIELNPIVNLETFDSINRSVGLSGFIRAKNEGEYIYQVISSWIDLLDELIVVFNDCSDNTEYEIKRAINDFGGKVKAF
KYLPKVFAQGSKEHVELPHDNVHSLVHYYNYALSKTTCKYAVKIDGDIIYDTSATDIIRSYLANSSETDYFKLHGVNLID
NHGELFIPSNSIFCGMNGDLCIFPVSKNNIFKWKKEFEFLDLSGLSDAGGVFAYYHMKFIKKDMGFSNYLLKDNPQSRYV
KITKEFIIRLRFLSIERTLNKFNITLKLPNTLRIKAKRKRDFKKDYKDELWNCGIVEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34539; Mature: 34539

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINIELNPIVNLETFDSINRSVGLSGFIRAKNEGEYIYQVISSWIDLLDELIVVFNDCSD
CEEEEECCEECCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEEECCCC
NTEYEIKRAINDFGGKVKAFKYLPKVFAQGSKEHVELPHDNVHSLVHYYNYALSKTTCKY
CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCCEEEE
AVKIDGDIIYDTSATDIIRSYLANSSETDYFKLHGVNLIDNHGELFIPSNSIFCGMNGDL
EEEECCEEEECCCHHHHHHHHHCCCCCCCEEEEECCEEEECCCCEEEECCCEEECCCCCE
CIFPVSKNNIFKWKKEFEFLDLSGLSDAGGVFAYYHMKFIKKDMGFSNYLLKDNPQSRYV
EEEEECCCCEEEHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHE
KITKEFIIRLRFLSIERTLNKFNITLKLPNTLRIKAKRKRDFKKDYKDELWNCGIVEL
EEEHHHHHHHHHHHHHHHHCEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MINIELNPIVNLETFDSINRSVGLSGFIRAKNEGEYIYQVISSWIDLLDELIVVFNDCSD
CEEEEECCEECCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEEECCCC
NTEYEIKRAINDFGGKVKAFKYLPKVFAQGSKEHVELPHDNVHSLVHYYNYALSKTTCKY
CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCCEEEE
AVKIDGDIIYDTSATDIIRSYLANSSETDYFKLHGVNLIDNHGELFIPSNSIFCGMNGDL
EEEECCEEEECCCHHHHHHHHHCCCCCCCEEEEECCEEEECCCCEEEECCCEEECCCCCE
CIFPVSKNNIFKWKKEFEFLDLSGLSDAGGVFAYYHMKFIKKDMGFSNYLLKDNPQSRYV
EEEEECCCCEEEHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHE
KITKEFIIRLRFLSIERTLNKFNITLKLPNTLRIKAKRKRDFKKDYKDELWNCGIVEL
EEEHHHHHHHHHHHHHHHHCEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA