Click here to switch to the map view.

The map label for this gene is tatC [H]

Identifier: 209696395

GI number: 209696395

Start: 3250202

End: 3250957

Strand: Direct

Name: tatC [H]

Synonym: VSAL_I3001

Alternate gene names: 209696395

Gene position: 3250202-3250957 (Clockwise)

Preceding gene: 209696394

Following gene: 209696396

Centisome position: 97.75

GC content: 40.21

Gene sequence:

>756_bases
ATGTCATCAGTTGAACACTCTCAGCCGTTGCTCACTCATTTACTAGAGTTAAGAAACCGTCTTTTAAAGGCATTAATTGC
CGTTATCGTGGTGTTTTTAGGTTTAGTTTGGTTTGCTAACGACATTTATGAGTTCCTATCTGCCCCTTTGGTTGAAAGAT
TACCAGCGGGTGCAACCATGATTGCAACTGATGTCGCGTCACCATTTTTCACGCCTATAAAGCTGACTTTGGTGGCATCG
ATATTTGTCGCTATTCCGGTGATTCTTTATCAAGTGTGGGCATTTGTAGCTCCTGGATTGTATAAGCATGAAAAGAAATT
GGTCATGCCTTTACTGTTTTCAAGCTCAATGCTGTTTTATGCAGGTGTTTCTTTCGCCTACTTTATTGTGTTTCCATTGG
TGTTTAGTTTCTTTACGAACATTGCACCGGAAGGCGTACAAGTAGCGACGGATATCTCCAGTTACCTTGATTTTGTATTA
GCATTGTTTTTAGCGTTTGGTATTGCGTTTGAAATTCCTGTTGCCATCATTTTATTATGTTGGACGGGAGCGACAACGCC
TGAAACGTTAAAACAAAAACGTCCATATATTGTCGTGGGTGCTTTTGTTGTTGGTATGATGCTAACACCGCCAGACATTA
TCTCTCAAACCTTACTTGCAGTGCCTATGTGTATTTTGTTTGAGTTTGGTTTGTTCTTTTCTCGTTTCTATGTGAGAGAG
AAAACAGATGATGATTTGGAGCAAGATGAAGCGTAG

Upstream 100 bases:

>100_bases
GTCCATATGCAAAACCAGAAGAAAAAGTAGAAGCACCGAGTGCAGACACTGAAACTTCCGTTGTATCTGACTCTACCTCT
AAAACAAAAGCAGAGTAATT

Downstream 100 bases:

>100_bases
TGCTTGATTGAAGCGAAAATAAAAAGCGTTGATATTATATCAGCGCTTTTTTTATGCCTGATTTTTGGATTTCAAATCGG
GTCTTGTGTTGATGAGAAAG

Product: sec-independent protein translocase protein TatC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSSVEHSQPLLTHLLELRNRLLKALIAVIVVFLGLVWFANDIYEFLSAPLVERLPAGATMIATDVASPFFTPIKLTLVAS
IFVAIPVILYQVWAFVAPGLYKHEKKLVMPLLFSSSMLFYAGVSFAYFIVFPLVFSFFTNIAPEGVQVATDISSYLDFVL
ALFLAFGIAFEIPVAIILLCWTGATTPETLKQKRPYIVVGAFVVGMMLTPPDIISQTLLAVPMCILFEFGLFFSRFYVRE
KTDDDLEQDEA

Sequences:

>Translated_251_residues
MSSVEHSQPLLTHLLELRNRLLKALIAVIVVFLGLVWFANDIYEFLSAPLVERLPAGATMIATDVASPFFTPIKLTLVAS
IFVAIPVILYQVWAFVAPGLYKHEKKLVMPLLFSSSMLFYAGVSFAYFIVFPLVFSFFTNIAPEGVQVATDISSYLDFVL
ALFLAFGIAFEIPVAIILLCWTGATTPETLKQKRPYIVVGAFVVGMMLTPPDIISQTLLAVPMCILFEFGLFFSRFYVRE
KTDDDLEQDEA
>Mature_250_residues
SSVEHSQPLLTHLLELRNRLLKALIAVIVVFLGLVWFANDIYEFLSAPLVERLPAGATMIATDVASPFFTPIKLTLVASI
FVAIPVILYQVWAFVAPGLYKHEKKLVMPLLFSSSMLFYAGVSFAYFIVFPLVFSFFTNIAPEGVQVATDISSYLDFVLA
LFLAFGIAFEIPVAIILLCWTGATTPETLKQKRPYIVVGAFVVGMMLTPPDIISQTLLAVPMCILFEFGLFFSRFYVREK
TDDDLEQDEA

Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei

COG id: COG0805

COG function: function code U; Sec-independent protein secretion pathway component TatC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatC family [H]

Homologues:

Organism=Escherichia coli, GI2367313, Length=247, Percent_Identity=68.8259109311741, Blast_Score=366, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002033
- InterPro:   IPR019820
- InterPro:   IPR019822 [H]

Pfam domain/function: PF00902 TatC [H]

EC number: NA

Molecular weight: Translated: 27997; Mature: 27865

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS01218 TATC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVEHSQPLLTHLLELRNRLLKALIAVIVVFLGLVWFANDIYEFLSAPLVERLPAGATM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHH
IATDVASPFFTPIKLTLVASIFVAIPVILYQVWAFVAPGLYKHEKKLVMPLLFSSSMLFY
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
AGVSFAYFIVFPLVFSFFTNIAPEGVQVATDISSYLDFVLALFLAFGIAFEIPVAIILLC
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WTGATTPETLKQKRPYIVVGAFVVGMMLTPPDIISQTLLAVPMCILFEFGLFFSRFYVRE
HCCCCCHHHHHHCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KTDDDLEQDEA
CCCCCCCCCCC
>Mature Secondary Structure 
SSVEHSQPLLTHLLELRNRLLKALIAVIVVFLGLVWFANDIYEFLSAPLVERLPAGATM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHH
IATDVASPFFTPIKLTLVASIFVAIPVILYQVWAFVAPGLYKHEKKLVMPLLFSSSMLFY
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
AGVSFAYFIVFPLVFSFFTNIAPEGVQVATDISSYLDFVLALFLAFGIAFEIPVAIILLC
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WTGATTPETLKQKRPYIVVGAFVVGMMLTPPDIISQTLLAVPMCILFEFGLFFSRFYVRE
HCCCCCHHHHHHCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KTDDDLEQDEA
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]