| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209696364
Identifier: 209696364
GI number: 209696364
Start: 3216114
End: 3216305
Strand: Direct
Name: 209696364
Synonym: VSAL_I2970
Alternate gene names: NA
Gene position: 3216114-3216305 (Clockwise)
Preceding gene: 209696363
Following gene: 209696365
Centisome position: 96.72
GC content: 36.46
Gene sequence:
>192_bases ATGCTTACTCAAATAGATCGCCTTACTATTTACTGCGTGCTGTGTTTTGTCACTATCTGTTCATTGGTTTTCAGCACACC TAACACCATGAGCCTCTTTCCATTAATTAGTTTAGCTTCGGTTATGATAGCGTTAACGATTGAACTAAAAACATGGAGTG AATCAGAGGCTATTGAAGATAAAGATCATTAA
Upstream 100 bases:
>100_bases TACCTTAAAGTAACAATAAATTAACATGGAACAGTTAAGTTGTTGTTTCTATGGTTTATAAAATCTCCTGTAGAAAAGTA ATAAAAGAAGGATCGCCATT
Downstream 100 bases:
>100_bases CCTCAGAATGTAACTGAAATATATCGACTCCAGTTTCCCGTATTATCACGTATTCTTGATATTAAATAAGAGGTAGGTGA AAAGCGGGATTTTTTTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MLTQIDRLTIYCVLCFVTICSLVFSTPNTMSLFPLISLASVMIALTIELKTWSESEAIEDKDH
Sequences:
>Translated_63_residues MLTQIDRLTIYCVLCFVTICSLVFSTPNTMSLFPLISLASVMIALTIELKTWSESEAIEDKDH >Mature_63_residues MLTQIDRLTIYCVLCFVTICSLVFSTPNTMSLFPLISLASVMIALTIELKTWSESEAIEDKDH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7097; Mature: 7097
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTQIDRLTIYCVLCFVTICSLVFSTPNTMSLFPLISLASVMIALTIELKTWSESEAIED CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC KDH CCC >Mature Secondary Structure MLTQIDRLTIYCVLCFVTICSLVFSTPNTMSLFPLISLASVMIALTIELKTWSESEAIED CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC KDH CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA