Click here to switch to the map view.

The map label for this gene is avtA [H]

Identifier: 209696357

GI number: 209696357

Start: 3207539

End: 3208786

Strand: Reverse

Name: avtA [H]

Synonym: VSAL_I2963

Alternate gene names: 209696357

Gene position: 3208786-3207539 (Counterclockwise)

Preceding gene: 209696362

Following gene: 209696356

Centisome position: 96.5

GC content: 42.87

Gene sequence:

>1248_bases
ATGAAGTTTACTCAATTTGGCGAAAAATTTACTCGTTACAGCGGGATCACCCAATTAATGGATGATTTAAATGATGGCTT
GCGTACCCCTGGTGCAATCATGCTCGGTGGCGGTAACCCTGCGGGTATTCCTGCCATGCTCGACTACTTTAAAAGTGCCT
CACAAAAGATGCTCGATTCAGGTGAGCTGATCGCTGCTATGGCAAATTATGACGGCCCACAAGGTAAGGACAGCTTTGTT
AAGGCCCTAGCTAAGCTGCTTAAAGAAACCTATGGTTGGGACATCAGTTCTAAAAACATTAGCCTAACCAATGGTTCTCA
AAGTGCGTTCTTTAGCTTATTCAATTTATTAGCGGGAACTTATGCTGATGGCTCTAAAAAGAAAATTTTATTGCCCCTCG
CGCCTGAATACATTGGTTATGCCGATTCTGAATTAGAAGTTGATAGCTTTATTTCTTACCGTCCAGAAATTGAATTACTC
GATAATGGTCAGTTCAAATACCACGTTGATTTTAGCCAATTAAAAGTAGATGACACCATAGGCGCTATTTGTATCTCTCG
CCCAACAAACCCAACAGGCAACGTGATCACCGACGATGAAGTGATCAAGCTTGATAAGCTTGCGCGTGAAAATAACATTC
CCTTAATTCTCGATAATGCTTATGGCACGCCTTTCCCTAATATTATTTTTGAAGAAGTGACGCCGTTTTGGAATGAAAAC
ACCATTCTTTGCATGAGCCTTTCTAAATTAGGTTTACCAGGCTTACGCTGTGGCATTGTGATTGCCAGCGAAAAGATGAC
AGCAGCCATGACCAACCTAAATGGCATTATCAGTTTAGCGCCGGGAAGTATGGGACCTGCGATGGGTTTACACATGATTG
AGTCTGGTGATTTATTACGTTTAAGTGAAGAGGTAATCCAACCTTTCTATCGCCATAAATCTCAAGCAGCGGTTAAGATG
CTACAAACGGCGATTACCGATCCTCGTTTTCGCATTCATAAACCTGAAGGCGCGATTTTCTTGTGGCTATGGTTTGATGA
ACTGCCAATCACAACCATGGAACTGTACAAACGCTTGAAAGCACGCGGCGTGCTGATCGTCCCGGGCGAGTATTTCTTTA
TTGGTCAAGACGACAGCTGGGATCACGCTCACCAATGTTTGCGTATGAACTACGTACAAGATGAAGAAATGATGCAAAAA
GGCATCGATATCATTGCAGAAGAAGTGCTAAAGGCCTATTCAAAGTAG

Upstream 100 bases:

>100_bases
TAAAAACACGACTCATCTTGGTGCTTTATCTCTGTTTGGTGTTGAGGTATGTTGTTAAAACAATCAATACATCCACTCTC
TAATTATCACGGTAGTCGTA

Downstream 100 bases:

>100_bases
ATAAAAAGCGGTGAGTTGTGGTACTCATGACTCATGGCTTTGGAATCAGCAATTCTGTTTGTCATCATAAAATTAACGGC
GCTTACAAATACCATCTATT

Product: valine--pyruvate transaminase

Products: NA

Alternate protein names: Alanine--valine transaminase; Transaminase C [H]

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MKFTQFGEKFTRYSGITQLMDDLNDGLRTPGAIMLGGGNPAGIPAMLDYFKSASQKMLDSGELIAAMANYDGPQGKDSFV
KALAKLLKETYGWDISSKNISLTNGSQSAFFSLFNLLAGTYADGSKKKILLPLAPEYIGYADSELEVDSFISYRPEIELL
DNGQFKYHVDFSQLKVDDTIGAICISRPTNPTGNVITDDEVIKLDKLARENNIPLILDNAYGTPFPNIIFEEVTPFWNEN
TILCMSLSKLGLPGLRCGIVIASEKMTAAMTNLNGIISLAPGSMGPAMGLHMIESGDLLRLSEEVIQPFYRHKSQAAVKM
LQTAITDPRFRIHKPEGAIFLWLWFDELPITTMELYKRLKARGVLIVPGEYFFIGQDDSWDHAHQCLRMNYVQDEEMMQK
GIDIIAEEVLKAYSK

Sequences:

>Translated_415_residues
MKFTQFGEKFTRYSGITQLMDDLNDGLRTPGAIMLGGGNPAGIPAMLDYFKSASQKMLDSGELIAAMANYDGPQGKDSFV
KALAKLLKETYGWDISSKNISLTNGSQSAFFSLFNLLAGTYADGSKKKILLPLAPEYIGYADSELEVDSFISYRPEIELL
DNGQFKYHVDFSQLKVDDTIGAICISRPTNPTGNVITDDEVIKLDKLARENNIPLILDNAYGTPFPNIIFEEVTPFWNEN
TILCMSLSKLGLPGLRCGIVIASEKMTAAMTNLNGIISLAPGSMGPAMGLHMIESGDLLRLSEEVIQPFYRHKSQAAVKM
LQTAITDPRFRIHKPEGAIFLWLWFDELPITTMELYKRLKARGVLIVPGEYFFIGQDDSWDHAHQCLRMNYVQDEEMMQK
GIDIIAEEVLKAYSK
>Mature_415_residues
MKFTQFGEKFTRYSGITQLMDDLNDGLRTPGAIMLGGGNPAGIPAMLDYFKSASQKMLDSGELIAAMANYDGPQGKDSFV
KALAKLLKETYGWDISSKNISLTNGSQSAFFSLFNLLAGTYADGSKKKILLPLAPEYIGYADSELEVDSFISYRPEIELL
DNGQFKYHVDFSQLKVDDTIGAICISRPTNPTGNVITDDEVIKLDKLARENNIPLILDNAYGTPFPNIIFEEVTPFWNEN
TILCMSLSKLGLPGLRCGIVIASEKMTAAMTNLNGIISLAPGSMGPAMGLHMIESGDLLRLSEEVIQPFYRHKSQAAVKM
LQTAITDPRFRIHKPEGAIFLWLWFDELPITTMELYKRLKARGVLIVPGEYFFIGQDDSWDHAHQCLRMNYVQDEEMMQK
GIDIIAEEVLKAYSK

Specific function: Unknown

COG id: COG3977

COG function: function code E; Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Escherichia coli, GI48994949, Length=415, Percent_Identity=63.3734939759036, Blast_Score=565, Evalue=1e-162,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.66 [H]

Molecular weight: Translated: 46221; Mature: 46221

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFTQFGEKFTRYSGITQLMDDLNDGLRTPGAIMLGGGNPAGIPAMLDYFKSASQKMLDS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCC
GELIAAMANYDGPQGKDSFVKALAKLLKETYGWDISSKNISLTNGSQSAFFSLFNLLAGT
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCC
YADGSKKKILLPLAPEYIGYADSELEVDSFISYRPEIELLDNGQFKYHVDFSQLKVDDTI
CCCCCCCEEEEEECHHHHCCCCCCCCHHHHHCCCCCEEEEECCCEEEEECHHHEEECCCC
GAICISRPTNPTGNVITDDEVIKLDKLARENNIPLILDNAYGTPFPNIIFEEVTPFWNEN
CEEEEECCCCCCCCEECCCHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCCCCC
TILCMSLSKLGLPGLRCGIVIASEKMTAAMTNLNGIISLAPGSMGPAMGLHMIESGDLLR
EEEEEEHHHCCCCCCEEEEEEECCHHHHHHHCCCCEEEECCCCCCCHHCEEEECCCCHHH
LSEEVIQPFYRHKSQAAVKMLQTAITDPRFRIHKPEGAIFLWLWFDELPITTMELYKRLK
HHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHH
ARGVLIVPGEYFFIGQDDSWDHAHQCLRMNYVQDEEMMQKGIDIIAEEVLKAYSK
HCCEEEECCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFTQFGEKFTRYSGITQLMDDLNDGLRTPGAIMLGGGNPAGIPAMLDYFKSASQKMLDS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCC
GELIAAMANYDGPQGKDSFVKALAKLLKETYGWDISSKNISLTNGSQSAFFSLFNLLAGT
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCC
YADGSKKKILLPLAPEYIGYADSELEVDSFISYRPEIELLDNGQFKYHVDFSQLKVDDTI
CCCCCCCEEEEEECHHHHCCCCCCCCHHHHHCCCCCEEEEECCCEEEEECHHHEEECCCC
GAICISRPTNPTGNVITDDEVIKLDKLARENNIPLILDNAYGTPFPNIIFEEVTPFWNEN
CEEEEECCCCCCCCEECCCHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCCCCC
TILCMSLSKLGLPGLRCGIVIASEKMTAAMTNLNGIISLAPGSMGPAMGLHMIESGDLLR
EEEEEEHHHCCCCCCEEEEEEECCHHHHHHHCCCCEEEECCCCCCCHHCEEEECCCCHHH
LSEEVIQPFYRHKSQAAVKMLQTAITDPRFRIHKPEGAIFLWLWFDELPITTMELYKRLK
HHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHH
ARGVLIVPGEYFFIGQDDSWDHAHQCLRMNYVQDEEMMQKGIDIIAEEVLKAYSK
HCCEEEECCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2825136; 8041620; 9278503 [H]