| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is cpxP [C]
Identifier: 209696202
GI number: 209696202
Start: 3028498
End: 3029004
Strand: Reverse
Name: cpxP [C]
Synonym: VSAL_I2796
Alternate gene names: 209696202
Gene position: 3029004-3028498 (Counterclockwise)
Preceding gene: 209696206
Following gene: 209696201
Centisome position: 91.09
GC content: 38.46
Gene sequence:
>507_bases ATGAATATGATTAAAAAATTAGTTTTAGGTGCTGTTGTTCTGCCTCTTTCTTTAGCGTCGGCTTCTGCATTCGCTGCTGG TGGTAGTCACCATGAAGGCGGAATGAAAGGTAAAGGCATGCATGGCGAAGGTATGCACGGTGGCAAGTGTATGATGAAAG CCAATAAAAAAGCGTTCAAAGAATTAGATTTAACCGATGCGCAAGAAGATAAATTAGATAAAATGCGTGATGATCGTAAA GCAGAACATAAAGCAAAAAAAGGGGAGAAACGTCAACCTACTGCTGAGATGAAAGCTGACCATGAAGCAATGCAAAATCT TATTTTAGCGGACAACTTTGATGAAGCCGCTGTTCGTAATCTAGCCGAGAAAATGTCAGAAAAACAAATTGATCGTCGTG TTAATATGATGAAAAAACGCCACGATATGATGAATGTTTTAACACCAGAACAAAAAACAGAATTCAAAGCGAACCAAGAT AAATATACGGCAGATTGCGCTAAATAA
Upstream 100 bases:
>100_bases TCAAGCACACAGCTTTACTTTACGTAAGCTATTATTACTCCATACCAAGCAGCAAGGCGCTGCCATTGACCGTAATACTA TCTATCGTGGAGATAACATA
Downstream 100 bases:
>100_bases TTACGCGAAATCTGAAGTAAATAAAAGCGAGTCTTTATGAATAATAAAGGCTCGCTTTTTTATTGCTTTCATTTTGTTAG GTATTTATTAACAAATGGAA
Product: periplasmic protein CpxP
Products: NA
Alternate protein names: Periplasmic Protein CpxP; Periplasmic Stress Adaptor Protein CpxP
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MNMIKKLVLGAVVLPLSLASASAFAAGGSHHEGGMKGKGMHGEGMHGGKCMMKANKKAFKELDLTDAQEDKLDKMRDDRK AEHKAKKGEKRQPTAEMKADHEAMQNLILADNFDEAAVRNLAEKMSEKQIDRRVNMMKKRHDMMNVLTPEQKTEFKANQD KYTADCAK
Sequences:
>Translated_168_residues MNMIKKLVLGAVVLPLSLASASAFAAGGSHHEGGMKGKGMHGEGMHGGKCMMKANKKAFKELDLTDAQEDKLDKMRDDRK AEHKAKKGEKRQPTAEMKADHEAMQNLILADNFDEAAVRNLAEKMSEKQIDRRVNMMKKRHDMMNVLTPEQKTEFKANQD KYTADCAK >Mature_168_residues MNMIKKLVLGAVVLPLSLASASAFAAGGSHHEGGMKGKGMHGEGMHGGKCMMKANKKAFKELDLTDAQEDKLDKMRDDRK AEHKAKKGEKRQPTAEMKADHEAMQNLILADNFDEAAVRNLAEKMSEKQIDRRVNMMKKRHDMMNVLTPEQKTEFKANQD KYTADCAK
Specific function: Aids In Combating Extracytoplasmic Protein-Mediated Toxicity. [C]
COG id: COG3678
COG function: function code UNTP; P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein
Gene ontology:
Cell location: Periplasmic [C]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994991, Length=151, Percent_Identity=33.7748344370861, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18760; Mature: 18760
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 8.9 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 8.9 %Met (Mature Protein) 10.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMIKKLVLGAVVLPLSLASASAFAAGGSHHEGGMKGKGMHGEGMHGGKCMMKANKKAFK CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ELDLTDAQEDKLDKMRDDRKAEHKAKKGEKRQPTAEMKADHEAMQNLILADNFDEAAVRN HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH LAEKMSEKQIDRRVNMMKKRHDMMNVLTPEQKTEFKANQDKYTADCAK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHCCCC >Mature Secondary Structure MNMIKKLVLGAVVLPLSLASASAFAAGGSHHEGGMKGKGMHGEGMHGGKCMMKANKKAFK CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ELDLTDAQEDKLDKMRDDRKAEHKAKKGEKRQPTAEMKADHEAMQNLILADNFDEAAVRN HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH LAEKMSEKQIDRRVNMMKKRHDMMNVLTPEQKTEFKANQDKYTADCAK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA