Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is fieF [H]

Identifier: 209696201

GI number: 209696201

Start: 3027433

End: 3028338

Strand: Reverse

Name: fieF [H]

Synonym: VSAL_I2795

Alternate gene names: 209696201

Gene position: 3028338-3027433 (Counterclockwise)

Preceding gene: 209696202

Following gene: 209696200

Centisome position: 91.07

GC content: 41.94

Gene sequence:

>906_bases
ATGACTAAAAAATACGCCTCCTTAGTAACCATGGCCGCTTGGCTTGCAACGATTGTTGCAACCATCTTAATGTTAGTAAA
GTTAGGAACATGGTGGGTTACCGGCTCGGTAAGTTTATTGGCGTCTTTGGTTGATTCATTACTTGATATGGCAGCATCTA
TCACCAATTTATTGGTTGTGCGTTACGCACTTCAGCCACCAGATGAAGAACACAGCTTTGGGCACGGTAAAGCGGAATCA
CTTGCGGCATTAGCACAAGCGATGTTTATTTCTGGCTCGGCGTGTTTTTTATTGTTAAATGGCGTAGAGCGCTTCTTCCG
CCCTCAAGATGTAATAAACCCTGAATTAGGTGTTTATGTGAGTGGTTTTGCCATCATATTGACCTTTGGGCTTGTTATGG
TTCAGCAATGGGTCGTTAAGCAAACAGGAAGCCAAGCGATTGCTGCGGATTCGTTGCATTATAAAACCGATCTTTTTATG
AACGCGGCCATTATGTTGGCGCTTGCGTTAAGCTGGTATGGTTGGCATGAAGCAGATGCTATTTTTGCTTTGATTATCGG
CATTTATATATTGATCAGTGCGTTTAGAATGGCGTATGAAGCGATTCAGTCATTGCTTGATAGACAATTGCCGATTGAAG
AGTTAGAGCAGATAAGAGAAGCGTGTTGTCGTGTTGATGGGGTAAAAGGTATTCATGATTTGCGTACGCGTTTAGCCGGA
CCAACTCGATTTATTCAATTGCATTTAGAGTTGCCAGATCAAATGCCGTTAGTCGAAGCGCATATTATTGCAGATAAAGT
GGAAGACGAACTTTTAACAGTATTTCCACATTCTGACATTATAATTCATCAAGACCCACTTTCAGTTGTGCTAGACTCAG
GAAAAGATCAAACACAGATCCAGTAA

Upstream 100 bases:

>100_bases
TTATTGCTTTCATTTTGTTAGGTATTTATTAACAAATGGAATAACGGTCAGCGAATTAAATCTTTATACTAGAGGATGAT
TTGTAAGTAATGGAAGAAAC

Downstream 100 bases:

>100_bases
GAATTAGTAGTATTATTAGCAATTATTGTTTTTTCGTAACAGAAAAATGAAATAGTCGTGATTGATTCTGATGTGAATCA
ACGAACTTTTTCAGTAAAAT

Product: ferrous iron efflux protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MTKKYASLVTMAAWLATIVATILMLVKLGTWWVTGSVSLLASLVDSLLDMAASITNLLVVRYALQPPDEEHSFGHGKAES
LAALAQAMFISGSACFLLLNGVERFFRPQDVINPELGVYVSGFAIILTFGLVMVQQWVVKQTGSQAIAADSLHYKTDLFM
NAAIMLALALSWYGWHEADAIFALIIGIYILISAFRMAYEAIQSLLDRQLPIEELEQIREACCRVDGVKGIHDLRTRLAG
PTRFIQLHLELPDQMPLVEAHIIADKVEDELLTVFPHSDIIIHQDPLSVVLDSGKDQTQIQ

Sequences:

>Translated_301_residues
MTKKYASLVTMAAWLATIVATILMLVKLGTWWVTGSVSLLASLVDSLLDMAASITNLLVVRYALQPPDEEHSFGHGKAES
LAALAQAMFISGSACFLLLNGVERFFRPQDVINPELGVYVSGFAIILTFGLVMVQQWVVKQTGSQAIAADSLHYKTDLFM
NAAIMLALALSWYGWHEADAIFALIIGIYILISAFRMAYEAIQSLLDRQLPIEELEQIREACCRVDGVKGIHDLRTRLAG
PTRFIQLHLELPDQMPLVEAHIIADKVEDELLTVFPHSDIIIHQDPLSVVLDSGKDQTQIQ
>Mature_300_residues
TKKYASLVTMAAWLATIVATILMLVKLGTWWVTGSVSLLASLVDSLLDMAASITNLLVVRYALQPPDEEHSFGHGKAESL
AALAQAMFISGSACFLLLNGVERFFRPQDVINPELGVYVSGFAIILTFGLVMVQQWVVKQTGSQAIAADSLHYKTDLFMN
AAIMLALALSWYGWHEADAIFALIIGIYILISAFRMAYEAIQSLLDRQLPIEELEQIREACCRVDGVKGIHDLRTRLAGP
TRFIQLHLELPDQMPLVEAHIIADKVEDELLTVFPHSDIIIHQDPLSVVLDSGKDQTQIQ

Specific function: Cation-efflux transporter that may have a role in detoxification [H]

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. FieF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=295, Percent_Identity=61.3559322033898, Blast_Score=362, Evalue=1e-101,
Organism=Escherichia coli, GI1786966, Length=242, Percent_Identity=28.099173553719, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 33289; Mature: 33158

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKYASLVTMAAWLATIVATILMLVKLGTWWVTGSVSLLASLVDSLLDMAASITNLLVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYALQPPDEEHSFGHGKAESLAALAQAMFISGSACFLLLNGVERFFRPQDVINPELGVYV
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHCCCCCCCHHH
SGFAIILTFGLVMVQQWVVKQTGSQAIAADSLHYKTDLFMNAAIMLALALSWYGWHEADA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
IFALIIGIYILISAFRMAYEAIQSLLDRQLPIEELEQIREACCRVDGVKGIHDLRTRLAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
PTRFIQLHLELPDQMPLVEAHIIADKVEDELLTVFPHSDIIIHQDPLSVVLDSGKDQTQI
CEEEEEEEEECCCCCCHHHHHHHHHHHHHHHEEEECCCCEEEECCHHHHHHCCCCCCCCC
Q
C
>Mature Secondary Structure 
TKKYASLVTMAAWLATIVATILMLVKLGTWWVTGSVSLLASLVDSLLDMAASITNLLVV
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYALQPPDEEHSFGHGKAESLAALAQAMFISGSACFLLLNGVERFFRPQDVINPELGVYV
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHCCCCCCCHHH
SGFAIILTFGLVMVQQWVVKQTGSQAIAADSLHYKTDLFMNAAIMLALALSWYGWHEADA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
IFALIIGIYILISAFRMAYEAIQSLLDRQLPIEELEQIREACCRVDGVKGIHDLRTRLAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
PTRFIQLHLELPDQMPLVEAHIIADKVEDELLTVFPHSDIIIHQDPLSVVLDSGKDQTQI
CEEEEEEEEECCCCCCHHHHHHHHHHHHHHHEEEECCCCEEEECCHHHHHHCCCCCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA