| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is argG [H]
Identifier: 209696164
GI number: 209696164
Start: 2989206
End: 2990417
Strand: Direct
Name: argG [H]
Synonym: VSAL_I2758
Alternate gene names: 209696164
Gene position: 2989206-2990417 (Clockwise)
Preceding gene: 209696163
Following gene: 209696176
Centisome position: 89.9
GC content: 42.24
Gene sequence:
>1212_bases ATGAATAAGAAAGTAAACGTAAACAAGGTCGTTGTTGCATACTCTGGTGGTCTAGATACATCTGTGATTATCCCGTGGTT AAAAGAAAACTACGATTGTGAAGTGATTGCATTTGTTGCTGATGTGGGTCAAGGGGCTGAAGAGTTAGAAGGTATTGAAG CTAAAGCGATTGCTTCCGGTGCATCTGAGTGCTATGTGGCTGACTTAAAAGAAGAAATGGTCTCTGAGTACATTTTTCCT ACGTTAAAAACAGGCGCTCTTTATGAGGGTAAATACCTACTTGGTACGTCAATGGCTCGTCCTATTATCGCAAAAGCACA AGTTGAAGTGGCGCGTAATGTTGGCGCAGATGCACTTTGCCATGGCTGCACAGGTAAAGGTAATGACCAAATCCGTTTTG AAGGTGCATTCGCAGCATTAGCACCAGATCTACACGTAATTGCACCATGGCGTGAGTGGGATTTAGTGAGCCGTGAAGAG TGTCTTGATTACCTTGCTGAACGTAATATCCCTTGTACTGCTTCACTTACAAAGATCTACTCTCGTGATGCAAACGCATG GCATATCTCAACTGAAGGTGGTGTTCTTGAAGATACATGGAACGAGCCAAACGAAGATTGCTGGGCATGGACTGTCGATC CAGAGCAAGCGCCAAATGAATCAGAAACAGTATCAATAAAAGTTGAAAAAGGCGCGGTTGTTGCCGTTGATGGTAAAGCG ATGACCCCTTATGAAGTGGTTGTTTATCTAAACGAGAAAGGAATAAAACACGGTGTTGGTCGTATCGATATCGTTGAAAA CCGCCTTGTTGGAATGAAATCTCGTGGTTGTTATGAAACTCCAGGTGGCACGATTATCAATGAAGCACTACGTGCGGTTG AGCAATTGGTGTTAGATAAAGCGTCATTTGAATTTCGTGAAGAGTTAGGGATCAAAGCCTCTCATCTTGTTTATGATGGT CGTTGGTTTACACCATTGTGTAAATCAATCTTAGCGGCAACAGAAGAACTGGCTCAAGACGTTAATGGTGATGTTGTTAT TAAGCTTTATAAAGGTCAAGCGACCGTAACTCAAAAGCGCTCTGATAATAGCTTGTATTCAGAAGAGTTTGCTACTTTTG GTGCTGATGAAGTTTACGACCAAAGCCATGCAGAAGGTTTTATCCGTCTTTACTCATTATCAAGCCGTATTCGTGCTCTA AATAGTAAGTAA
Upstream 100 bases:
>100_bases GGAAATAGCATCGGCACACAGTTTCAGCCTTAATTGGCATTGAATAGAATTAACTTTATAGAATACAGTCGCCGCGAGTA TGCGGATCAAGGAGAATAGA
Downstream 100 bases:
>100_bases TTACTATTATGTAACAACTGTTTGATAATTTGTTTTACACTAGTCGAAGTTCATTTAATGATTAAATGAACTTCGATTTT TTTTGTCTACATTATTATAA
Product: argininosuccinate synthase
Products: NA
Alternate protein names: Citrulline--aspartate ligase [H]
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MNKKVNVNKVVVAYSGGLDTSVIIPWLKENYDCEVIAFVADVGQGAEELEGIEAKAIASGASECYVADLKEEMVSEYIFP TLKTGALYEGKYLLGTSMARPIIAKAQVEVARNVGADALCHGCTGKGNDQIRFEGAFAALAPDLHVIAPWREWDLVSREE CLDYLAERNIPCTASLTKIYSRDANAWHISTEGGVLEDTWNEPNEDCWAWTVDPEQAPNESETVSIKVEKGAVVAVDGKA MTPYEVVVYLNEKGIKHGVGRIDIVENRLVGMKSRGCYETPGGTIINEALRAVEQLVLDKASFEFREELGIKASHLVYDG RWFTPLCKSILAATEELAQDVNGDVVIKLYKGQATVTQKRSDNSLYSEEFATFGADEVYDQSHAEGFIRLYSLSSRIRAL NSK
Sequences:
>Translated_403_residues MNKKVNVNKVVVAYSGGLDTSVIIPWLKENYDCEVIAFVADVGQGAEELEGIEAKAIASGASECYVADLKEEMVSEYIFP TLKTGALYEGKYLLGTSMARPIIAKAQVEVARNVGADALCHGCTGKGNDQIRFEGAFAALAPDLHVIAPWREWDLVSREE CLDYLAERNIPCTASLTKIYSRDANAWHISTEGGVLEDTWNEPNEDCWAWTVDPEQAPNESETVSIKVEKGAVVAVDGKA MTPYEVVVYLNEKGIKHGVGRIDIVENRLVGMKSRGCYETPGGTIINEALRAVEQLVLDKASFEFREELGIKASHLVYDG RWFTPLCKSILAATEELAQDVNGDVVIKLYKGQATVTQKRSDNSLYSEEFATFGADEVYDQSHAEGFIRLYSLSSRIRAL NSK >Mature_403_residues MNKKVNVNKVVVAYSGGLDTSVIIPWLKENYDCEVIAFVADVGQGAEELEGIEAKAIASGASECYVADLKEEMVSEYIFP TLKTGALYEGKYLLGTSMARPIIAKAQVEVARNVGADALCHGCTGKGNDQIRFEGAFAALAPDLHVIAPWREWDLVSREE CLDYLAERNIPCTASLTKIYSRDANAWHISTEGGVLEDTWNEPNEDCWAWTVDPEQAPNESETVSIKVEKGAVVAVDGKA MTPYEVVVYLNEKGIKHGVGRIDIVENRLVGMKSRGCYETPGGTIINEALRAVEQLVLDKASFEFREELGIKASHLVYDG RWFTPLCKSILAATEELAQDVNGDVVIKLYKGQATVTQKRSDNSLYSEEFATFGADEVYDQSHAEGFIRLYSLSSRIRAL NSK
Specific function: Arginine biosynthesis; seventh step. [C]
COG id: COG0137
COG function: function code E; Argininosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the argininosuccinate synthase family. Type 1 subfamily [H]
Homologues:
Organism=Homo sapiens, GI53759107, Length=394, Percent_Identity=43.1472081218274, Blast_Score=306, Evalue=3e-83, Organism=Homo sapiens, GI16950633, Length=394, Percent_Identity=43.1472081218274, Blast_Score=306, Evalue=3e-83, Organism=Escherichia coli, GI1789563, Length=403, Percent_Identity=26.0545905707196, Blast_Score=126, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6324514, Length=400, Percent_Identity=39.25, Blast_Score=278, Evalue=1e-75, Organism=Drosophila melanogaster, GI21358151, Length=408, Percent_Identity=39.9509803921569, Blast_Score=277, Evalue=1e-74,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001518 - InterPro: IPR018223 - InterPro: IPR014729 [H]
Pfam domain/function: PF00764 Arginosuc_synth [H]
EC number: =6.3.4.5 [H]
Molecular weight: Translated: 44340; Mature: 44340
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00564 ARGININOSUCCIN_SYN_1 ; PS00565 ARGININOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKVNVNKVVVAYSGGLDTSVIIPWLKENYDCEVIAFVADVGQGAEELEGIEAKAIASG CCCCCCCEEEEEEEECCCCCEEEEEHHCCCCCCEEEEEEEHHCCCHHHHCCCCHHHHHCC ASECYVADLKEEMVSEYIFPTLKTGALYEGKYLLGTSMARPIIAKAQVEVARNVGADALC CCHHHHHHHHHHHHHHHHCCCCCCCCEECCCEEECCHHCCCHHHHHHHHHHHCCCHHHHE HGCTGKGNDQIRFEGAFAALAPDLHVIAPWREWDLVSREECLDYLAERNIPCTASLTKIY ECCCCCCCCEEEEECCHHHHCCCCEEECCCHHCCCCCHHHHHHHHHHCCCCCCHHHHHHH SRDANAWHISTEGGVLEDTWNEPNEDCWAWTVDPEQAPNESETVSIKVEKGAVVAVDGKA CCCCCEEEEECCCCEEECCCCCCCCCEEEEEECHHCCCCCCCEEEEEEECCEEEEECCCC MTPYEVVVYLNEKGIKHGVGRIDIVENRLVGMKSRGCYETPGGTIINEALRAVEQLVLDK CCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ASFEFREELGIKASHLVYDGRWFTPLCKSILAATEELAQDVNGDVVIKLYKGQATVTQKR HHHHHHHHHCCEEHEEEECCEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCC SDNSLYSEEFATFGADEVYDQSHAEGFIRLYSLSSRIRALNSK CCCCHHHHHHHHCCCHHHHHHHHHHHEEEEEHHHHHHHHHCCC >Mature Secondary Structure MNKKVNVNKVVVAYSGGLDTSVIIPWLKENYDCEVIAFVADVGQGAEELEGIEAKAIASG CCCCCCCEEEEEEEECCCCCEEEEEHHCCCCCCEEEEEEEHHCCCHHHHCCCCHHHHHCC ASECYVADLKEEMVSEYIFPTLKTGALYEGKYLLGTSMARPIIAKAQVEVARNVGADALC CCHHHHHHHHHHHHHHHHCCCCCCCCEECCCEEECCHHCCCHHHHHHHHHHHCCCHHHHE HGCTGKGNDQIRFEGAFAALAPDLHVIAPWREWDLVSREECLDYLAERNIPCTASLTKIY ECCCCCCCCEEEEECCHHHHCCCCEEECCCHHCCCCCHHHHHHHHHHCCCCCCHHHHHHH SRDANAWHISTEGGVLEDTWNEPNEDCWAWTVDPEQAPNESETVSIKVEKGAVVAVDGKA CCCCCEEEEECCCCEEECCCCCCCCCEEEEEECHHCCCCCCCEEEEEEECCEEEEECCCC MTPYEVVVYLNEKGIKHGVGRIDIVENRLVGMKSRGCYETPGGTIINEALRAVEQLVLDK CCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ASFEFREELGIKASHLVYDGRWFTPLCKSILAATEELAQDVNGDVVIKLYKGQATVTQKR HHHHHHHHHCCEEHEEEECCEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCC SDNSLYSEEFATFGADEVYDQSHAEGFIRLYSLSSRIRALNSK CCCCHHHHHHHHCCCHHHHHHHHHHHEEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA