Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is damX [C]

Identifier: 209696130

GI number: 209696130

Start: 2950010

End: 2951527

Strand: Direct

Name: damX [C]

Synonym: VSAL_I2724

Alternate gene names: 209696130

Gene position: 2950010-2951527 (Clockwise)

Preceding gene: 209696129

Following gene: 209696131

Centisome position: 88.72

GC content: 37.22

Gene sequence:

>1518_bases
ATGAATATTGGTCATGATTCAACTGTTTTAGAATTAGAAAGTCAGATTGATGTGTTATCTCGCATTCAGTTTGTTTCTCG
TTTTGGTTCTAATTTGGTACATATTGAAGGAGTTAAAGGCTCTGGAAAGTCATGGCTATCTCAGCGTTATCTTGAAAAAT
GGTGTGATGATGCAGATCAAGTACTATTGATGTGCCATACCAATCAATCAATATATCAACAGCGTGGGATCATTTTAAAA
CAGATGGTTCGTGATCCGCTTTTTAATGAGCACGATACTGTTGTTGATAGTATTAGTCGGATGTTAGCGGGTGAAAAGTG
CAACTTAGTTCTGGTTATTGATGACGCACATCTACTCTCTTCTGAGTTACTTAGTGAGTTGTGGTTACTGGTTCAAAAAG
CACAGTCAGCGTCTAACTGGCAAATTAATGTGCTGCTTTTTGCTGATAAAGGAACGTTAACACAACCTTTATCGCAGATG
TCTTATGGGCAGGACAGTAAACCGATTGATATTGATATTGAGTTATTGACGCAAGATGAAGCTGCAACGTTTTCTGAAAT
GCTTGTGATTCGTTTTGCATCAAGCAAAGAAGAGAAAGCAAGAATTCGTCGCTTGGTGAATAAGAATAATAGATTGCCAG
GGAAACTTATTATATTAGGTGAGAAAAAAGCAGAACGACGAGTAATTATTCGTTCAGTAGCGCAATCTCCCGTTGGTATT
TTAAGTTTAGCGGCTATTTTACTTCTTGGTTCCGCAGGTGGTTATTGGTGGATGAATCAGTCATCGTTGCCTTCTATGAA
CTCAATGCTTCATGATTCACTGAATCAATCATTAAATAATGACAGTTTAGTCTTAGATGCACTTAATAAAGAAAACTCAG
AGCTTAACAGTATTAATCTGCCTGAAGATGATACACATACGATCCCTCCTGATGTGATTGATAAGCCGATAATTATTGAA
TCAAGTAAAGAAGAAGGTAAGCGTGTTGTCGTCCCCTCTGAAGTGGTTGATGCTTTAGTCGGTGATTCTGAATCTTTGGA
TGAATCGGCGTCATTAACGTCTTCTGCAGATGATATTCTTGCTACTCAAGAGACGGTAAATAAAGAAAATACGACATCAG
TGTCTTCTAAAAAAGAAGATATGGCGAGTATTGTTAATGAGAGTAAGCCTTTAGTTGTCGAAAAAAATACAGACGTAGGC
AAAGAACGTATTACGTTTACTTTGGCTAATTCTGAACTTAAAGCCATTTCTGAAAAGCGCTATATATTGCAATTAGCCGC
TTTAACAAATGAAGAAGCAGTGCAAGAGTTCTTAGATGAACATCAACTTGGAAGTTCAGCTCGAATTTATCAAGCATTAA
GAAATGGTTCGATTTGGTATATCGTGAGTTATGGTGATTATGTCTCCATTTCAAAAGCTCGTGGTGCGGTGAAGAATCTA
CCAAATTCAGTTCAAACTCTGGGTCCTTGGGCAAAATCTTTAGTTCAAGTACATCGAGAAATTGATTCTTTAAAATAA

Upstream 100 bases:

>100_bases
ACGTTTGGTACTCCCAACTTCAATTGGTAGCTCTGAGGTCGTAACAGGTGTTTCTGAGCGTGTTCTCGCTGATGTGATAG
AGCAATGTAAGGCATAAACG

Downstream 100 bases:

>100_bases
CACTGAGTATTGATTAAAAATAGGGTACAATCGCCCGCTTTCTGGATTAGGGTAAAAGGCTAAAAAGACGTATGAAAAAG
CATCGCGCATTTCTTAAGTG

Product: cell division protein

Products: NA

Alternate protein names: DamX-Like Protein; Sporulation And Repeat Protein

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MNIGHDSTVLELESQIDVLSRIQFVSRFGSNLVHIEGVKGSGKSWLSQRYLEKWCDDADQVLLMCHTNQSIYQQRGIILK
QMVRDPLFNEHDTVVDSISRMLAGEKCNLVLVIDDAHLLSSELLSELWLLVQKAQSASNWQINVLLFADKGTLTQPLSQM
SYGQDSKPIDIDIELLTQDEAATFSEMLVIRFASSKEEKARIRRLVNKNNRLPGKLIILGEKKAERRVIIRSVAQSPVGI
LSLAAILLLGSAGGYWWMNQSSLPSMNSMLHDSLNQSLNNDSLVLDALNKENSELNSINLPEDDTHTIPPDVIDKPIIIE
SSKEEGKRVVVPSEVVDALVGDSESLDESASLTSSADDILATQETVNKENTTSVSSKKEDMASIVNESKPLVVEKNTDVG
KERITFTLANSELKAISEKRYILQLAALTNEEAVQEFLDEHQLGSSARIYQALRNGSIWYIVSYGDYVSISKARGAVKNL
PNSVQTLGPWAKSLVQVHREIDSLK

Sequences:

>Translated_505_residues
MNIGHDSTVLELESQIDVLSRIQFVSRFGSNLVHIEGVKGSGKSWLSQRYLEKWCDDADQVLLMCHTNQSIYQQRGIILK
QMVRDPLFNEHDTVVDSISRMLAGEKCNLVLVIDDAHLLSSELLSELWLLVQKAQSASNWQINVLLFADKGTLTQPLSQM
SYGQDSKPIDIDIELLTQDEAATFSEMLVIRFASSKEEKARIRRLVNKNNRLPGKLIILGEKKAERRVIIRSVAQSPVGI
LSLAAILLLGSAGGYWWMNQSSLPSMNSMLHDSLNQSLNNDSLVLDALNKENSELNSINLPEDDTHTIPPDVIDKPIIIE
SSKEEGKRVVVPSEVVDALVGDSESLDESASLTSSADDILATQETVNKENTTSVSSKKEDMASIVNESKPLVVEKNTDVG
KERITFTLANSELKAISEKRYILQLAALTNEEAVQEFLDEHQLGSSARIYQALRNGSIWYIVSYGDYVSISKARGAVKNL
PNSVQTLGPWAKSLVQVHREIDSLK
>Mature_505_residues
MNIGHDSTVLELESQIDVLSRIQFVSRFGSNLVHIEGVKGSGKSWLSQRYLEKWCDDADQVLLMCHTNQSIYQQRGIILK
QMVRDPLFNEHDTVVDSISRMLAGEKCNLVLVIDDAHLLSSELLSELWLLVQKAQSASNWQINVLLFADKGTLTQPLSQM
SYGQDSKPIDIDIELLTQDEAATFSEMLVIRFASSKEEKARIRRLVNKNNRLPGKLIILGEKKAERRVIIRSVAQSPVGI
LSLAAILLLGSAGGYWWMNQSSLPSMNSMLHDSLNQSLNNDSLVLDALNKENSELNSINLPEDDTHTIPPDVIDKPIIIE
SSKEEGKRVVVPSEVVDALVGDSESLDESASLTSSADDILATQETVNKENTTSVSSKKEDMASIVNESKPLVVEKNTDVG
KERITFTLANSELKAISEKRYILQLAALTNEEAVQEFLDEHQLGSSARIYQALRNGSIWYIVSYGDYVSISKARGAVKNL
PNSVQTLGPWAKSLVQVHREIDSLK

Specific function: Directly Or Indirectly Interferes With Cell Division. [C]

COG id: COG3267

COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56083; Mature: 56083

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIGHDSTVLELESQIDVLSRIQFVSRFGSNLVHIEGVKGSGKSWLSQRYLEKWCDDADQ
CCCCCCCHHEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCC
VLLMCHTNQSIYQQRGIILKQMVRDPLFNEHDTVVDSISRMLAGEKCNLVLVIDDAHLLS
EEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHH
SELLSELWLLVQKAQSASNWQINVLLFADKGTLTQPLSQMSYGQDSKPIDIDIELLTQDE
HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEEECCH
AATFSEMLVIRFASSKEEKARIRRLVNKNNRLPGKLIILGEKKAERRVIIRSVAQSPVGI
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHH
LSLAAILLLGSAGGYWWMNQSSLPSMNSMLHDSLNQSLNNDSLVLDALNKENSELNSINL
HHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC
PEDDTHTIPPDVIDKPIIIESSKEEGKRVVVPSEVVDALVGDSESLDESASLTSSADDIL
CCCCCCCCCHHHCCCCEEEECCCCCCCEEECCHHHHHHHHCCCCCCCCHHCCCCCHHHHH
ATQETVNKENTTSVSSKKEDMASIVNESKPLVVEKNTDVGKERITFTLANSELKAISEKR
HHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEECCHHHHHHHHH
YILQLAALTNEEAVQEFLDEHQLGSSARIYQALRNGSIWYIVSYGDYVSISKARGAVKNL
HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCEEEEHHHHHHHHHC
PNSVQTLGPWAKSLVQVHREIDSLK
CHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIGHDSTVLELESQIDVLSRIQFVSRFGSNLVHIEGVKGSGKSWLSQRYLEKWCDDADQ
CCCCCCCHHEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCC
VLLMCHTNQSIYQQRGIILKQMVRDPLFNEHDTVVDSISRMLAGEKCNLVLVIDDAHLLS
EEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHH
SELLSELWLLVQKAQSASNWQINVLLFADKGTLTQPLSQMSYGQDSKPIDIDIELLTQDE
HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEEECCH
AATFSEMLVIRFASSKEEKARIRRLVNKNNRLPGKLIILGEKKAERRVIIRSVAQSPVGI
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHH
LSLAAILLLGSAGGYWWMNQSSLPSMNSMLHDSLNQSLNNDSLVLDALNKENSELNSINL
HHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC
PEDDTHTIPPDVIDKPIIIESSKEEGKRVVVPSEVVDALVGDSESLDESASLTSSADDIL
CCCCCCCCCHHHCCCCEEEECCCCCCCEEECCHHHHHHHHCCCCCCCCHHCCCCCHHHHH
ATQETVNKENTTSVSSKKEDMASIVNESKPLVVEKNTDVGKERITFTLANSELKAISEKR
HHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEECCHHHHHHHHH
YILQLAALTNEEAVQEFLDEHQLGSSARIYQALRNGSIWYIVSYGDYVSISKARGAVKNL
HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCEEEEHHHHHHHHHC
PNSVQTLGPWAKSLVQVHREIDSLK
CHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA