Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209696095

Identifier: 209696095

GI number: 209696095

Start: 2909078

End: 2909779

Strand: Reverse

Name: 209696095

Synonym: VSAL_I2687

Alternate gene names: NA

Gene position: 2909779-2909078 (Counterclockwise)

Preceding gene: 209696096

Following gene: 209696094

Centisome position: 87.51

GC content: 38.89

Gene sequence:

>702_bases
ATGAGTACTTTCTTTTCTCATCCTTCAAAGTTTTTGATAGGTTCATTGGTGATATTACCTCCCTTTGCTTTATCCTTGGT
TATCGCGTTGCCTTATTATGAAGCAAGTAAGCAAGAAATTGTTCCCTATCACGCCAATTATGTTGAGTTAGCATTCCCTA
CATGGGAAACACAAAAGATCCCTATGCGCCGTCATTTGTTAGCGCTTAATTCTTCAAATAATGCAAAGAAAGAGGTAGAG
ACGCCTCTATCTGATAAGACTGGATTCGGTACAGTCAAGCGTGTTCCCGCTCAAGCTAATTCAAGCATTACGTCAGCGAA
ACAAGAAAAAGATTTTAATATTAATAATTTAGATTTATCTGGATTGTCACCTGAGCTTGCAGCGCGGTTTGAATCGGCTA
TGAATGATCCGGCAGACGTTAATCAAGAGAAAGAATTTGTTTGGGATAATGATGAATCGACCATTGAACTTGTTAAAAAT
GGGGCTGAATTTATGGGGCGATTACCCGCGTTGAATTTTCAGACGCACAATTACACATCTAAGCTCAGTCAGCGGTGGGT
AAAAGTGAATGGAAAAGAAGTCAGTGCAGGGGAGAAAATCACACCTAGTGTGTCATTACTTGAGATTAACCCAAGAAATG
TAATCATTGAGTTTGAAAATAAAAAAATTGAAGTGCCTGCACTTTATGAGTGGAAAGGATGA

Upstream 100 bases:

>100_bases
TTTCGGTTTGAAGACAGATGGAGTGGTGGGGTCAAGTACGTTAATGTGGTTAGACAGTGTGATAAATACCAATGTCCCTA
TGCTTCAAGGAGACAAATAA

Downstream 100 bases:

>100_bases
TGGATGTTCTTTCTGTATAAATAAGTGGATTATATAGATACAAAAAAGCTCAGAATAATTCTGAGCTTTTTTGTATTAGT
TGAACCTTAATAAATGTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: General Secretion Pathway Protein A; Type II Secretory Pathway Component ExeA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSTFFSHPSKFLIGSLVILPPFALSLVIALPYYEASKQEIVPYHANYVELAFPTWETQKIPMRRHLLALNSSNNAKKEVE
TPLSDKTGFGTVKRVPAQANSSITSAKQEKDFNINNLDLSGLSPELAARFESAMNDPADVNQEKEFVWDNDESTIELVKN
GAEFMGRLPALNFQTHNYTSKLSQRWVKVNGKEVSAGEKITPSVSLLEINPRNVIIEFENKKIEVPALYEWKG

Sequences:

>Translated_233_residues
MSTFFSHPSKFLIGSLVILPPFALSLVIALPYYEASKQEIVPYHANYVELAFPTWETQKIPMRRHLLALNSSNNAKKEVE
TPLSDKTGFGTVKRVPAQANSSITSAKQEKDFNINNLDLSGLSPELAARFESAMNDPADVNQEKEFVWDNDESTIELVKN
GAEFMGRLPALNFQTHNYTSKLSQRWVKVNGKEVSAGEKITPSVSLLEINPRNVIIEFENKKIEVPALYEWKG
>Mature_232_residues
STFFSHPSKFLIGSLVILPPFALSLVIALPYYEASKQEIVPYHANYVELAFPTWETQKIPMRRHLLALNSSNNAKKEVET
PLSDKTGFGTVKRVPAQANSSITSAKQEKDFNINNLDLSGLSPELAARFESAMNDPADVNQEKEFVWDNDESTIELVKNG
AEFMGRLPALNFQTHNYTSKLSQRWVKVNGKEVSAGEKITPSVSLLEINPRNVIIEFENKKIEVPALYEWKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26187; Mature: 26056

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFFSHPSKFLIGSLVILPPFALSLVIALPYYEASKQEIVPYHANYVELAFPTWETQKI
CCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCEECCCEEEEEECCCCCCCC
PMRRHLLALNSSNNAKKEVETPLSDKTGFGTVKRVPAQANSSITSAKQEKDFNINNLDLS
CHHHEEEEECCCCCCHHHHCCCCCCCCCCCHHEECCCCCCCCHHHHHHHCCCCCCCEECC
GLSPELAARFESAMNDPADVNQEKEFVWDNDESTIELVKNGAEFMGRLPALNFQTHNYTS
CCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHCCHHHHHCCCCCEEECCCHHH
KLSQRWVKVNGKEVSAGEKITPSVSLLEINPRNVIIEFENKKIEVPALYEWKG
HHHHHHEEECCEEECCCCCCCCCEEEEEECCCEEEEEECCCEEECCEEEECCC
>Mature Secondary Structure 
STFFSHPSKFLIGSLVILPPFALSLVIALPYYEASKQEIVPYHANYVELAFPTWETQKI
CCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCEECCCEEEEEECCCCCCCC
PMRRHLLALNSSNNAKKEVETPLSDKTGFGTVKRVPAQANSSITSAKQEKDFNINNLDLS
CHHHEEEEECCCCCCHHHHCCCCCCCCCCCHHEECCCCCCCCHHHHHHHCCCCCCCEECC
GLSPELAARFESAMNDPADVNQEKEFVWDNDESTIELVKNGAEFMGRLPALNFQTHNYTS
CCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHCCHHHHHCCCCCEEECCCHHH
KLSQRWVKVNGKEVSAGEKITPSVSLLEINPRNVIIEFENKKIEVPALYEWKG
HHHHHHEEECCEEECCCCCCCCCEEEEEECCCEEEEEECCCEEECCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA