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The map label for this gene is petA [H]

Identifier: 209696070

GI number: 209696070

Start: 2880089

End: 2880697

Strand: Reverse

Name: petA [H]

Synonym: VSAL_I2662

Alternate gene names: 209696070

Gene position: 2880697-2880089 (Counterclockwise)

Preceding gene: 209696071

Following gene: 209696069

Centisome position: 86.63

GC content: 45.81

Gene sequence:

>609_bases
ATGGGAGAAAGTTGGATGAGCAATGCGCCAGTGAGTAATGGTCGACGTCGTTTCTTGACTGCAACAACAGCTGTTGTTGG
TGGTTTAGGGGCAGCGGCGGTGGCCGTACCTTTTATTAAATCTTGGAACCCGAGTGCACGAGCCAAAGCGGCAGGTGCAC
CGGTTGAAGTCGACATCAGTAAGCTTGAAAACGGGCAAATGGTTCGTGTTGAATGGCGAGGTAAGCCTGTATGGGTTGTT
CGTCGTTCAGAAGCACTTCTGCAATCATTAACTGAAATTGACGGACAACTTAGAGACCCATCTTCAGGTGAAGAGCAGCA
ACCTCAATATGCACAAAATGCATATCGCTCAATTAAACCTGAGATATTTTTAGCCGTTGGTATTTGTACTCACCTTGGTT
GTTCACCTACCTATTTACCTGACAGTTTTAGTGAACAAGTTAAAGGAGTTAACTCTGGTTTCTTCTGCCCATGCCATGGT
TCTAAATTTGATATGGCAGGTCGAGTATTCCAAGGCGTACCTGCACCATTAAATCTCGTGGTGCCAAAACACATGTACCT
TAGTGATACTCGTATCCTAATTGGGGTTGATGACGGAGGGGAAGCCTAA

Upstream 100 bases:

>100_bases
TTTTAAAGCTTTGGACATCAATATTCTGTTGTTCCACACCTTAAAAAGTTAGCCGTAGCTCGACAATGTATGGACATAAT
AAAAACTATATAAAGAGCAC

Downstream 100 bases:

>100_bases
TGCAACCATTACTTGATTGGGTAGAAAAACGTCTACCTGCAATGAATGCCTATAAAAAGCATTTATCTGAATATCCAATG
CCGAAAAACTTTAACTTTTG

Product: ubiquinol-cytochrome c reductase iron-sulfur subunit (rieske iron-sulfur protein)

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MGESWMSNAPVSNGRRRFLTATTAVVGGLGAAAVAVPFIKSWNPSARAKAAGAPVEVDISKLENGQMVRVEWRGKPVWVV
RRSEALLQSLTEIDGQLRDPSSGEEQQPQYAQNAYRSIKPEIFLAVGICTHLGCSPTYLPDSFSEQVKGVNSGFFCPCHG
SKFDMAGRVFQGVPAPLNLVVPKHMYLSDTRILIGVDDGGEA

Sequences:

>Translated_202_residues
MGESWMSNAPVSNGRRRFLTATTAVVGGLGAAAVAVPFIKSWNPSARAKAAGAPVEVDISKLENGQMVRVEWRGKPVWVV
RRSEALLQSLTEIDGQLRDPSSGEEQQPQYAQNAYRSIKPEIFLAVGICTHLGCSPTYLPDSFSEQVKGVNSGFFCPCHG
SKFDMAGRVFQGVPAPLNLVVPKHMYLSDTRILIGVDDGGEA
>Mature_201_residues
GESWMSNAPVSNGRRRFLTATTAVVGGLGAAAVAVPFIKSWNPSARAKAAGAPVEVDISKLENGQMVRVEWRGKPVWVVR
RSEALLQSLTEIDGQLRDPSSGEEQQPQYAQNAYRSIKPEIFLAVGICTHLGCSPTYLPDSFSEQVKGVNSGFFCPCHGS
KFDMAGRVFQGVPAPLNLVVPKHMYLSDTRILIGVDDGGEA

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=197, Percent_Identity=32.994923857868, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17540418, Length=185, Percent_Identity=35.1351351351351, Blast_Score=97, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6320811, Length=179, Percent_Identity=33.5195530726257, Blast_Score=102, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24580896, Length=159, Percent_Identity=35.8490566037736, Blast_Score=104, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 21777; Mature: 21646

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGESWMSNAPVSNGRRRFLTATTAVVGGLGAAAVAVPFIKSWNPSARAKAAGAPVEVDIS
CCCCCCCCCCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEHH
KLENGQMVRVEWRGKPVWVVRRSEALLQSLTEIDGQLRDPSSGEEQQPQYAQNAYRSIKP
HCCCCCEEEEEECCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC
EIFLAVGICTHLGCSPTYLPDSFSEQVKGVNSGFFCPCHGSKFDMAGRVFQGVPAPLNLV
EEEEEEEHHHHCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCEEEE
VPKHMYLSDTRILIGVDDGGEA
CCCCEEECCCEEEEEECCCCCC
>Mature Secondary Structure 
GESWMSNAPVSNGRRRFLTATTAVVGGLGAAAVAVPFIKSWNPSARAKAAGAPVEVDIS
CCCCCCCCCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEHH
KLENGQMVRVEWRGKPVWVVRRSEALLQSLTEIDGQLRDPSSGEEQQPQYAQNAYRSIKP
HCCCCCEEEEEECCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC
EIFLAVGICTHLGCSPTYLPDSFSEQVKGVNSGFFCPCHGSKFDMAGRVFQGVPAPLNLV
EEEEEEEHHHHCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCEEEE
VPKHMYLSDTRILIGVDDGGEA
CCCCEEECCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA