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The map label for this gene is yraM [C]

Identifier: 209696062

GI number: 209696062

Start: 2873413

End: 2875224

Strand: Direct

Name: yraM [C]

Synonym: VSAL_I2654

Alternate gene names: 209696062

Gene position: 2873413-2875224 (Clockwise)

Preceding gene: 209696046

Following gene: 209696063

Centisome position: 86.41

GC content: 40.12

Gene sequence:

>1812_bases
ATGGCAAATATGACCTTTAGAAAGAACAGTGTAACACGCCTTGTTGCTCCTGTAGCCTTAGCGCTAACATTAGCCGCGTG
TTCAAGCTCACCGACATCCCCTGAGCGTCTTGATATCACTCAATCGCCATCAGAAACAAGTTCTGCTTATATTCTAAAAG
CCGATCAGCAACAAGGTAACTTACAAGCTAACTTACTTATCATGGCATTGAAGGCCGCGGTACAAGAACAGAATACAGAG
CTCTCTAAAAATTTACTTACGCGTTTAGCTACGATGGATTTATCCCCAGCTCAAATCGCTGAGATTCAGTTAATAAAAGC
AGAGCAACTGAAGTCACAAAATAAATACACTCAAGCGTTGCAAGAACTAAATTTTGAAGCTTGGTGGAAACTAGAAAACT
CACAATGGATTGAGTACTACGAGCTTCGTCATGAACTGTATTTATTTAATGGCGACAATCTGAATGCGGCAAGAGAGCTC
ATTCAATTAGAACCTTTTAAAGCTCAAGATCAAAAAGCGCAATTATGGTCACAAGTATGGACGAATATTTCATCACTAAA
TAGCGCAAGCCTTCAAGCAATACAACTTGACGAAAAAGAAAACATTCTTCATGGCTGGGTCCAATTAGCAACCTATTCAG
ACACACTAAAACACTCTCCTGTTCGTTTGCAGCAAGCATTTAAAGACTGGTTACAAGCAAATCCAATGCATCCCGCAGCG
ACTTACACTCCACAAGAAGTATTAGATATATTAGCATTAGATATTGTTCGTCCAGAGCATGTCGCTTTACTTCTTCCTTT
GACTGGCCGCTTTGGACCACAAGGTATGCGTGTACGCGATGGCTTTATTAATGCCATGATGGAAGATAAAGAACGTGACG
ATTTCACTACATTAAAAATTATCGACACTCAAGTAACCCCAATGTCAGAGATTCTTCCTATCCTTGATAAAGAGCAAATT
CAATTTGTGGTTGGCCCGCTAATTCGCAGTGAAATTGAAGAGTTTCAGACCTTAAATTCAGCAGACATTCCGCAACTCGC
GCTTAATATTCCAAGCGAAATTAATGTTGATAAAAACAGCTGCTATTTCACTCTATCTCCGGAACAAGAAGTAGAGCAAG
CAGCCATTCACTTATTTAAACTTGGTCACAAACATCCCCTGTTTCTTGCTCCGCAAGGAAGAATGGGTGAACGTTTGAAT
CAAGCATTCAGTGATAAATGGTTCCAATTAACGTCACAAAAACCATCGACAAGTTACTTTGGTTCAAAAGCACAGCTACA
ACAAAAAGTGAACAGCGTATTTGGCCTTGAAAGCAGCCAAGCTCGTATTTACCAAATGAACGCCTTAGCTGGTATTGATT
TAGAATCTCAACCACGCAGTCGTCGTGATATTGATGCGGTCTATATGATTGCAACCAGTGGTGAATTAACGCTACTAAAA
CCATTTATTGAAGTGGCGATTAACCCAGGTATTACACCGCCTAAATTATACGCAAGTTCACGCAGTAACAATGGACGTCA
AACACAGCTAGCTGAAATTCGTGGTGTTGAATTCAGTGACATTCCACTACTGACAAACGAAAACCACAGTTTTAATGTTC
AGTTTGAAAAACTATGGCCTGACAGCAGTAATGGTGAAACTCGACTTCACGCACTTGGTATGGATGCTTACCAACTAATT
ACCGAATTACCACAGATGAAAGCGGTAGATAATTATCAAATGGAAGGTAAAACCGGTGAGTTAAGCATTAACCAAGAATG
TGTGATTCAACGAAAAATGAGTTGGGCTATTCATGGAGAAGAAACCGAATAA

Upstream 100 bases:

>100_bases
ATAAGTAGACATCACTATAATGAAAATAATATTTTAGCTGTTCGGGTGATTCGCATCCATAGTAAAAACAGCCCTTTTAA
GTAGGACCAGTATATTACCC

Downstream 100 bases:

>100_bases
ACGAATTAAAGGTGAATATTATGAGTTGATGGCAAAGCGCTATTTAGAGACACATCAACTCACATTCATCGAGCGTAATT
TTTATTCAAAAACGGGAGAG

Product: lipoprotein LppC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 603; Mature: 602

Protein sequence:

>603_residues
MANMTFRKNSVTRLVAPVALALTLAACSSSPTSPERLDITQSPSETSSAYILKADQQQGNLQANLLIMALKAAVQEQNTE
LSKNLLTRLATMDLSPAQIAEIQLIKAEQLKSQNKYTQALQELNFEAWWKLENSQWIEYYELRHELYLFNGDNLNAAREL
IQLEPFKAQDQKAQLWSQVWTNISSLNSASLQAIQLDEKENILHGWVQLATYSDTLKHSPVRLQQAFKDWLQANPMHPAA
TYTPQEVLDILALDIVRPEHVALLLPLTGRFGPQGMRVRDGFINAMMEDKERDDFTTLKIIDTQVTPMSEILPILDKEQI
QFVVGPLIRSEIEEFQTLNSADIPQLALNIPSEINVDKNSCYFTLSPEQEVEQAAIHLFKLGHKHPLFLAPQGRMGERLN
QAFSDKWFQLTSQKPSTSYFGSKAQLQQKVNSVFGLESSQARIYQMNALAGIDLESQPRSRRDIDAVYMIATSGELTLLK
PFIEVAINPGITPPKLYASSRSNNGRQTQLAEIRGVEFSDIPLLTNENHSFNVQFEKLWPDSSNGETRLHALGMDAYQLI
TELPQMKAVDNYQMEGKTGELSINQECVIQRKMSWAIHGEETE

Sequences:

>Translated_603_residues
MANMTFRKNSVTRLVAPVALALTLAACSSSPTSPERLDITQSPSETSSAYILKADQQQGNLQANLLIMALKAAVQEQNTE
LSKNLLTRLATMDLSPAQIAEIQLIKAEQLKSQNKYTQALQELNFEAWWKLENSQWIEYYELRHELYLFNGDNLNAAREL
IQLEPFKAQDQKAQLWSQVWTNISSLNSASLQAIQLDEKENILHGWVQLATYSDTLKHSPVRLQQAFKDWLQANPMHPAA
TYTPQEVLDILALDIVRPEHVALLLPLTGRFGPQGMRVRDGFINAMMEDKERDDFTTLKIIDTQVTPMSEILPILDKEQI
QFVVGPLIRSEIEEFQTLNSADIPQLALNIPSEINVDKNSCYFTLSPEQEVEQAAIHLFKLGHKHPLFLAPQGRMGERLN
QAFSDKWFQLTSQKPSTSYFGSKAQLQQKVNSVFGLESSQARIYQMNALAGIDLESQPRSRRDIDAVYMIATSGELTLLK
PFIEVAINPGITPPKLYASSRSNNGRQTQLAEIRGVEFSDIPLLTNENHSFNVQFEKLWPDSSNGETRLHALGMDAYQLI
TELPQMKAVDNYQMEGKTGELSINQECVIQRKMSWAIHGEETE
>Mature_602_residues
ANMTFRKNSVTRLVAPVALALTLAACSSSPTSPERLDITQSPSETSSAYILKADQQQGNLQANLLIMALKAAVQEQNTEL
SKNLLTRLATMDLSPAQIAEIQLIKAEQLKSQNKYTQALQELNFEAWWKLENSQWIEYYELRHELYLFNGDNLNAARELI
QLEPFKAQDQKAQLWSQVWTNISSLNSASLQAIQLDEKENILHGWVQLATYSDTLKHSPVRLQQAFKDWLQANPMHPAAT
YTPQEVLDILALDIVRPEHVALLLPLTGRFGPQGMRVRDGFINAMMEDKERDDFTTLKIIDTQVTPMSEILPILDKEQIQ
FVVGPLIRSEIEEFQTLNSADIPQLALNIPSEINVDKNSCYFTLSPEQEVEQAAIHLFKLGHKHPLFLAPQGRMGERLNQ
AFSDKWFQLTSQKPSTSYFGSKAQLQQKVNSVFGLESSQARIYQMNALAGIDLESQPRSRRDIDAVYMIATSGELTLLKP
FIEVAINPGITPPKLYASSRSNNGRQTQLAEIRGVEFSDIPLLTNENHSFNVQFEKLWPDSSNGETRLHALGMDAYQLIT
ELPQMKAVDNYQMEGKTGELSINQECVIQRKMSWAIHGEETE

Specific function: Unknown

COG id: COG3107

COG function: function code R; Putative lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yraM [H]

Homologues:

Organism=Escherichia coli, GI1789537, Length=313, Percent_Identity=34.185303514377, Blast_Score=166, Evalue=4e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007443 [H]

Pfam domain/function: PF04348 LppC [H]

EC number: NA

Molecular weight: Translated: 68131; Mature: 68000

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANMTFRKNSVTRLVAPVALALTLAACSSSPTSPERLDITQSPSETSSAYILKADQQQGN
CCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCC
LQANLLIMALKAAVQEQNTELSKNLLTRLATMDLSPAQIAEIQLIKAEQLKSQNKYTQAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEHHHHHHHHHHHHHH
QELNFEAWWKLENSQWIEYYELRHELYLFNGDNLNAARELIQLEPFKAQDQKAQLWSQVW
HHCCCEEEEEECCCCHHHHHEEEEEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHH
TNISSLNSASLQAIQLDEKENILHGWVQLATYSDTLKHSPVRLQQAFKDWLQANPMHPAA
HHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
TYTPQEVLDILALDIVRPEHVALLLPLTGRFGPQGMRVRDGFINAMMEDKERDDFTTLKI
CCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEHHHHHHHHHCCCCCCCCEEEEE
IDTQVTPMSEILPILDKEQIQFVVGPLIRSEIEEFQTLNSADIPQLALNIPSEINVDKNS
EECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCCCCCCCCC
CYFTLSPEQEVEQAAIHLFKLGHKHPLFLAPQGRMGERLNQAFSDKWFQLTSQKPSTSYF
EEEEECCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCHHEEECCCCCCCCCC
GSKAQLQQKVNSVFGLESSQARIYQMNALAGIDLESQPRSRRDIDAVYMIATSGELTLLK
CCHHHHHHHHHHHHCCCCCCCEEEEEECEECCCCCCCCCCCCCCCEEEEEEECCCEEEHH
PFIEVAINPGITPPKLYASSRSNNGRQTQLAEIRGVEFSDIPLLTNENHSFNVQFEKLWP
HHHHHHCCCCCCCCHHEECCCCCCCCCEEHHHHCCCCCCCCCEEECCCCEEEEEEEEECC
DSSNGETRLHALGMDAYQLITELPQMKAVDNYQMEGKTGELSINQECVIQRKMSWAIHGE
CCCCCCEEEEEECCHHHHHHHHCHHHHCCCCEEECCCCCCEECCHHHHHHHHHEEEECCC
ETE
CCC
>Mature Secondary Structure 
ANMTFRKNSVTRLVAPVALALTLAACSSSPTSPERLDITQSPSETSSAYILKADQQQGN
CCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCC
LQANLLIMALKAAVQEQNTELSKNLLTRLATMDLSPAQIAEIQLIKAEQLKSQNKYTQAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEHHHHHHHHHHHHHH
QELNFEAWWKLENSQWIEYYELRHELYLFNGDNLNAARELIQLEPFKAQDQKAQLWSQVW
HHCCCEEEEEECCCCHHHHHEEEEEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHH
TNISSLNSASLQAIQLDEKENILHGWVQLATYSDTLKHSPVRLQQAFKDWLQANPMHPAA
HHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
TYTPQEVLDILALDIVRPEHVALLLPLTGRFGPQGMRVRDGFINAMMEDKERDDFTTLKI
CCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEHHHHHHHHHCCCCCCCCEEEEE
IDTQVTPMSEILPILDKEQIQFVVGPLIRSEIEEFQTLNSADIPQLALNIPSEINVDKNS
EECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCCCCCCCCC
CYFTLSPEQEVEQAAIHLFKLGHKHPLFLAPQGRMGERLNQAFSDKWFQLTSQKPSTSYF
EEEEECCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCHHEEECCCCCCCCCC
GSKAQLQQKVNSVFGLESSQARIYQMNALAGIDLESQPRSRRDIDAVYMIATSGELTLLK
CCHHHHHHHHHHHHCCCCCCCEEEEEECEECCCCCCCCCCCCCCCEEEEEEECCCEEEHH
PFIEVAINPGITPPKLYASSRSNNGRQTQLAEIRGVEFSDIPLLTNENHSFNVQFEKLWP
HHHHHHCCCCCCCCHHEECCCCCCCCCEEHHHHCCCCCCCCCEEECCCCEEEEEEEEECC
DSSNGETRLHALGMDAYQLITELPQMKAVDNYQMEGKTGELSINQECVIQRKMSWAIHGE
CCCCCCEEEEEECCHHHHHHHHCHHHHCCCCEEECCCCCCEECCHHHHHHHHHEEEECCC
ETE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]