Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is gntP [C]

Identifier: 209696009

GI number: 209696009

Start: 2796247

End: 2797512

Strand: Direct

Name: gntP [C]

Synonym: VSAL_I2593

Alternate gene names: 209696009

Gene position: 2796247-2797512 (Clockwise)

Preceding gene: 209696008

Following gene: 209696010

Centisome position: 84.09

GC content: 44.23

Gene sequence:

>1266_bases
ATGATCGAAGTATCTACTTTGGGTGCACTGGCCGCTCTCACCGTTTCAATTACGCTCATTTTGAGAAAAGTACCGCCTGC
GTATGGCATGATCATTGGTGCGCTTATCGGTGGTATCGTTGGTGGAGTGTCTTTAACCGATACTGTAAATTTAATGATTG
GCGGTGCACAAAGTATCGTTACAGCAGTACTTCGAATTCTAGCAGCAGGTGTTCTTGCTGGTGTTCTGATTGAATCAGGA
GCAGCAACTTCGATAGCAGAAACTATTGTTAAAAAAGTAGGAGAAACCAGAGCTTTACTCGCACTCGCCGTCGCAACGAT
GATTTTAACTGCCGTAGGTGTCTTTGTTGACGTAGCAGTAATTACCGTTGCTCCGATTGCATTAGCGATTGCTCGTCGTG
CTGACCTTTCAAAAATGGCAATTCTATTAGCTATGGTTGGTGGCGGTAAAGCAGGTAATGTGATGTCACCTAACCCAAAT
GCGATTGCTGCTGCTGATGCCTTTAATGTTCCTTTAACTTCGGTAATGGCTGCCGGTGTTATTCCTGGTTTATTTGGCGT
CGTTTTCGCTTACTTTATTGCGAAAAAATTAGTGAATAAAGGCAGTAAAGTTCAAGAACACGAAATCGTCTCTGTTGATC
ATTCTCGTCTACCAAGTTTTGTTGCTTCAATGGTTGCCCCTCTTGTTGCTATCAGCCTTCTTGCCTTACGTCCTATCGCA
GGAATTAATGTTGACCCTTTAATTGCCCTTCCACTTGGTGGCTTACTTGGTGCTCTAGCAATGGGCCGATTTAAAGACAC
TAACCATTTTGCAGTATCCGGTCTATCTCGAATGGCTCCCGTTGCAGTGATGTTGCTAGGTACAGGTACACTCGCTGGTA
TCATTGCAAATTCAGGTCTCAAATCAGGGTTGATTGAAGTATTAACTGCATCTGGTCTTCCTTCTTATTTATTAGCACCA
ATTTCTGGTGCCATGATGTCACTAGCAACAGCATCAACCACAGCCGGTACTGCCGTTGCTGCAAGTGTATTTAGTCATAC
TATCCTAGAGCTTGGCGTGCCTGCTCTTGCTGGTGCCGCAATGATTCATGCAGGTGCAACGGTATTTGATCACATGCCAC
ACGGCAGTTTCTTTCATGCGACAGGCGGTGCTGTTCATATGGATATGAAAGAACGCTTAAAACTAATCCCTTACGAATCA
GCAGTCGGTCTAATGATCGCTACCGTCTCTACTCTTATTTTTGGCGTCTTTGGTTTATTTGTTTAA

Upstream 100 bases:

>100_bases
AATAGATTATCTGTCAATTAAATTTGGTCATTAGTCTAAAGCTTATTATCGTTGTTACCGATAGATTACCGACATCTTAA
TTATTAAACGGAACATTAAT

Downstream 100 bases:

>100_bases
TAAGGCTTTATTATGAAAATTGTTATTGCTCCCGATTCATACAAAGAAAGTTTGACCGCAATGGAAGTTGCTACCGCAAT
TGAAGCTGGATTTAAACAAG

Product: gluconate permease

Products: Proton [Cytoplasm]; gluconate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MIEVSTLGALAALTVSITLILRKVPPAYGMIIGALIGGIVGGVSLTDTVNLMIGGAQSIVTAVLRILAAGVLAGVLIESG
AATSIAETIVKKVGETRALLALAVATMILTAVGVFVDVAVITVAPIALAIARRADLSKMAILLAMVGGGKAGNVMSPNPN
AIAAADAFNVPLTSVMAAGVIPGLFGVVFAYFIAKKLVNKGSKVQEHEIVSVDHSRLPSFVASMVAPLVAISLLALRPIA
GINVDPLIALPLGGLLGALAMGRFKDTNHFAVSGLSRMAPVAVMLLGTGTLAGIIANSGLKSGLIEVLTASGLPSYLLAP
ISGAMMSLATASTTAGTAVAASVFSHTILELGVPALAGAAMIHAGATVFDHMPHGSFFHATGGAVHMDMKERLKLIPYES
AVGLMIATVSTLIFGVFGLFV

Sequences:

>Translated_421_residues
MIEVSTLGALAALTVSITLILRKVPPAYGMIIGALIGGIVGGVSLTDTVNLMIGGAQSIVTAVLRILAAGVLAGVLIESG
AATSIAETIVKKVGETRALLALAVATMILTAVGVFVDVAVITVAPIALAIARRADLSKMAILLAMVGGGKAGNVMSPNPN
AIAAADAFNVPLTSVMAAGVIPGLFGVVFAYFIAKKLVNKGSKVQEHEIVSVDHSRLPSFVASMVAPLVAISLLALRPIA
GINVDPLIALPLGGLLGALAMGRFKDTNHFAVSGLSRMAPVAVMLLGTGTLAGIIANSGLKSGLIEVLTASGLPSYLLAP
ISGAMMSLATASTTAGTAVAASVFSHTILELGVPALAGAAMIHAGATVFDHMPHGSFFHATGGAVHMDMKERLKLIPYES
AVGLMIATVSTLIFGVFGLFV
>Mature_421_residues
MIEVSTLGALAALTVSITLILRKVPPAYGMIIGALIGGIVGGVSLTDTVNLMIGGAQSIVTAVLRILAAGVLAGVLIESG
AATSIAETIVKKVGETRALLALAVATMILTAVGVFVDVAVITVAPIALAIARRADLSKMAILLAMVGGGKAGNVMSPNPN
AIAAADAFNVPLTSVMAAGVIPGLFGVVFAYFIAKKLVNKGSKVQEHEIVSVDHSRLPSFVASMVAPLVAISLLALRPIA
GINVDPLIALPLGGLLGALAMGRFKDTNHFAVSGLSRMAPVAVMLLGTGTLAGIIANSGLKSGLIEVLTASGLPSYLLAP
ISGAMMSLATASTTAGTAVAASVFSHTILELGVPALAGAAMIHAGATVFDHMPHGSFFHATGGAVHMDMKERLKLIPYES
AVGLMIATVSTLIFGVFGLFV

Specific function: High-Affinity Gluconate Transporter With Fairly Broad Specificity, Including Low Affinity For Glucuronate, Several Disaccharides, And Some Hexoses, But Not Glucose. [C]

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003474 [H]

Pfam domain/function: PF02447 GntP_permease [H]

EC number: NA

Molecular weight: Translated: 42364; Mature: 42364

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVSTLGALAALTVSITLILRKVPPAYGMIIGALIGGIVGGVSLTDTVNLMIGGAQSIV
CEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHEECCHHHHH
TAVLRILAAGVLAGVLIESGAATSIAETIVKKVGETRALLALAVATMILTAVGVFVDVAV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
ITVAPIALAIARRADLSKMAILLAMVGGGKAGNVMSPNPNAIAAADAFNVPLTSVMAAGV
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHH
IPGLFGVVFAYFIAKKLVNKGSKVQEHEIVSVDHSRLPSFVASMVAPLVAISLLALRPIA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCCC
GINVDPLIALPLGGLLGALAMGRFKDTNHFAVSGLSRMAPVAVMLLGTGTLAGIIANSGL
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCH
KSGLIEVLTASGLPSYLLAPISGAMMSLATASTTAGTAVAASVFSHTILELGVPALAGAA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
MIHAGATVFDHMPHGSFFHATGGAVHMDMKERLKLIPYESAVGLMIATVSTLIFGVFGLF
HHHCCCHHHHCCCCCCEEECCCCEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
V
C
>Mature Secondary Structure
MIEVSTLGALAALTVSITLILRKVPPAYGMIIGALIGGIVGGVSLTDTVNLMIGGAQSIV
CEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHEECCHHHHH
TAVLRILAAGVLAGVLIESGAATSIAETIVKKVGETRALLALAVATMILTAVGVFVDVAV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
ITVAPIALAIARRADLSKMAILLAMVGGGKAGNVMSPNPNAIAAADAFNVPLTSVMAAGV
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHH
IPGLFGVVFAYFIAKKLVNKGSKVQEHEIVSVDHSRLPSFVASMVAPLVAISLLALRPIA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCCC
GINVDPLIALPLGGLLGALAMGRFKDTNHFAVSGLSRMAPVAVMLLGTGTLAGIIANSGL
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCH
KSGLIEVLTASGLPSYLLAPISGAMMSLATASTTAGTAVAASVFSHTILELGVPALAGAA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
MIHAGATVFDHMPHGSFFHATGGAVHMDMKERLKLIPYESAVGLMIATVSTLIFGVFGLF
HHHCCCHHHHCCCCCCEEECCCCEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; gluconate [Periplasm] [C]

Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]