| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is ytfK [C]
Identifier: 209695954
GI number: 209695954
Start: 2717851
End: 2718054
Strand: Direct
Name: ytfK [C]
Synonym: VSAL_I2536
Alternate gene names: 209695954
Gene position: 2717851-2718054 (Clockwise)
Preceding gene: 209695953
Following gene: 209695958
Centisome position: 81.74
GC content: 38.24
Gene sequence:
>204_bases ATGCGATTTTTTAAGCACTATGCACCAAGCATGATTGCTAAACATATTAGTCGACTATTTAACGGACGGATTCATATTCA TGGCATTGGCGAATTTAGATTTGAAGAGGGCCGCTTGATTGTCCCAACTCAAGCAGAGCGTGTGCATTATCGTATGATAA AAGAAATAAATGTTGAGGTTAATCGCTTGAGAATGGCCTATTAA
Upstream 100 bases:
>100_bases CACCATATTCTAACTCTGTAATACTCATGTCATCTTTACTGTCTTATAATTTAGGCCTAGCACGAGATTTAATTAGTATT AATCACCTAAGGATAACGTG
Downstream 100 bases:
>100_bases TACAGAATCATTAAACGTAAAAAATCAAGAATTGAACACTAAAAAAGGTAGCCATGAGCTACCTTTTTACTGTCTACTTA ATGGGATTATTTTGCTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MRFFKHYAPSMIAKHISRLFNGRIHIHGIGEFRFEEGRLIVPTQAERVHYRMIKEINVEVNRLRMAY
Sequences:
>Translated_67_residues MRFFKHYAPSMIAKHISRLFNGRIHIHGIGEFRFEEGRLIVPTQAERVHYRMIKEINVEVNRLRMAY >Mature_67_residues MRFFKHYAPSMIAKHISRLFNGRIHIHGIGEFRFEEGRLIVPTQAERVHYRMIKEINVEVNRLRMAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082392, Length=64, Percent_Identity=34.375, Blast_Score=60, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8113; Mature: 8113
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFFKHYAPSMIAKHISRLFNGRIHIHGIGEFRFEEGRLIVPTQAERVHYRMIKEINVEV CCCHHHCCHHHHHHHHHHHHCCEEEEEECCCEEECCCCEECCCCHHHHHHHHHHHHCCEE NRLRMAY EEEEECC >Mature Secondary Structure MRFFKHYAPSMIAKHISRLFNGRIHIHGIGEFRFEEGRLIVPTQAERVHYRMIKEINVEV CCCHHHCCHHHHHHHHHHHHCCEEEEEECCCEEECCCCEECCCCHHHHHHHHHHHHCCEE NRLRMAY EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA