| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209695913
Identifier: 209695913
GI number: 209695913
Start: 2675480
End: 2675896
Strand: Direct
Name: 209695913
Synonym: VSAL_I2495
Alternate gene names: NA
Gene position: 2675480-2675896 (Clockwise)
Preceding gene: 209695911
Following gene: 209695916
Centisome position: 80.46
GC content: 41.25
Gene sequence:
>417_bases ATGACACGCTTTGAACACGCCAACATCACCGTTCCAAACATAGATGCGGCCATCGCTTTTCTATTAAATGCAGCACCTGA CTTTAGAGTCAAAATAGATCAAACGCCAGTAGGTAGTTATCGATGGGCTCATGTCGGTAACGATGAATGTTATTTTGCCT TACAAGAACCCAAAGATGCGATCTCATCACAAGATACCCGTAAGCCCTATCACAATATCGGTGTTAACCATATTGGAATG ATCGTCGACAATTTAGACCGTCTTCAGGAAAAATTACTTACTTTAGGTTACGAACAGAATGGTCTAGTCACTCAAGAAAA ACATGGGCGACGTACTTACTTTTATGACAAAGCAGGATTCGAGTGGGAGTTAGTAGAATACGACAGTGAAAAGCCGGAAG AACGTTACAGTTACTAA
Upstream 100 bases:
>100_bases AAATAATAGTGAACAAAAAAACATATAATGTATTGACCTAAAGTTAACTTTACCTTTTACAGTGTCTCTACGTTAATAAT GAGTATAACAAGGAGTCACT
Downstream 100 bases:
>100_bases TCAATAAGAAAGGGCGAACTCAAATAGGTTTGCCCATTTTTTGTATTAATTAAATCGACGTCAATTTACGCGTCTTTAGA TTGCAGTATTTTATGGGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase Family Protein; Lactoylglutathione Lyase
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTRFEHANITVPNIDAAIAFLLNAAPDFRVKIDQTPVGSYRWAHVGNDECYFALQEPKDAISSQDTRKPYHNIGVNHIGM IVDNLDRLQEKLLTLGYEQNGLVTQEKHGRRTYFYDKAGFEWELVEYDSEKPEERYSY
Sequences:
>Translated_138_residues MTRFEHANITVPNIDAAIAFLLNAAPDFRVKIDQTPVGSYRWAHVGNDECYFALQEPKDAISSQDTRKPYHNIGVNHIGM IVDNLDRLQEKLLTLGYEQNGLVTQEKHGRRTYFYDKAGFEWELVEYDSEKPEERYSY >Mature_137_residues TRFEHANITVPNIDAAIAFLLNAAPDFRVKIDQTPVGSYRWAHVGNDECYFALQEPKDAISSQDTRKPYHNIGVNHIGMI VDNLDRLQEKLLTLGYEQNGLVTQEKHGRRTYFYDKAGFEWELVEYDSEKPEERYSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16045; Mature: 15914
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFEHANITVPNIDAAIAFLLNAAPDFRVKIDQTPVGSYRWAHVGNDECYFALQEPKDA CCCCCCCCEECCCHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCEEEEECCCHHH ISSQDTRKPYHNIGVNHIGMIVDNLDRLQEKLLTLGYEQNGLVTQEKHGRRTYFYDKAGF HCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEEEECCCCC EWELVEYDSEKPEERYSY EEEEEECCCCCCHHHCCC >Mature Secondary Structure TRFEHANITVPNIDAAIAFLLNAAPDFRVKIDQTPVGSYRWAHVGNDECYFALQEPKDA CCCCCCCEECCCHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCEEEEECCCHHH ISSQDTRKPYHNIGVNHIGMIVDNLDRLQEKLLTLGYEQNGLVTQEKHGRRTYFYDKAGF HCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEEEECCCCC EWELVEYDSEKPEERYSY EEEEEECCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA