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The map label for this gene is fdx [H]

Identifier: 209695888

GI number: 209695888

Start: 2640926

End: 2641180

Strand: Direct

Name: fdx [H]

Synonym: VSAL_I2467

Alternate gene names: 209695888

Gene position: 2640926-2641180 (Clockwise)

Preceding gene: 209695887

Following gene: 209695889

Centisome position: 79.42

GC content: 40.78

Gene sequence:

>255_bases
ATGGCGTTATTGATCAATAAAAAATGCATTAACTGTGATATGTGTGAGCCTGAGTGTCCAAACGAAGCGATCACCATGGG
CGACAAGATCTACGAAATCAATCCCGATCTTTGTACTGAATGTAAGGGACACTACGAAGTCCCTACGTGTCAGTCAGTTT
GCCCGATTAACAATTGCGTTATTTCTGATCCAAACAACATAGAAACGGATGATCAGCTATTAGAAAAATTTGTGAAACTT
CAAGGTCTCGCCTAG

Upstream 100 bases:

>100_bases
GTTCATCCCTGTTCCTGCAAACGTAGATTTAGAATACGGTCTATTAATGCGTAACTTACACACGGGTGAAGACACTCGTA
ACCCACACGGTAAGTAAGTA

Downstream 100 bases:

>100_bases
TTTTTACTGCTCTTCTTGTTTCACTAAAAATGCCCAATGACCGTTAAATGTCATTGGGCATTTTTGTATCTTAACGGTGT
GTTTCTTATTTCTTGATAAG

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MALLINKKCINCDMCEPECPNEAITMGDKIYEINPDLCTECKGHYEVPTCQSVCPINNCVISDPNNIETDDQLLEKFVKL
QGLA

Sequences:

>Translated_84_residues
MALLINKKCINCDMCEPECPNEAITMGDKIYEINPDLCTECKGHYEVPTCQSVCPINNCVISDPNNIETDDQLLEKFVKL
QGLA
>Mature_83_residues
ALLINKKCINCDMCEPECPNEAITMGDKIYEINPDLCTECKGHYEVPTCQSVCPINNCVISDPNNIETDDQLLEKFVKLQ
GLA

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=81, Percent_Identity=71.6049382716049, Blast_Score=126, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9380; Mature: 9249

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
14.3 %Cys+Met (Translated Protein)
10.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
13.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLINKKCINCDMCEPECPNEAITMGDKIYEINPDLCTECKGHYEVPTCQSVCPINNCV
CEEEECCCCCCCCCCCCCCCCCEEECCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCCEE
ISDPNNIETDDQLLEKFVKLQGLA
ECCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALLINKKCINCDMCEPECPNEAITMGDKIYEINPDLCTECKGHYEVPTCQSVCPINNCV
EEEECCCCCCCCCCCCCCCCCEEECCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCCEE
ISDPNNIETDDQLLEKFVKLQGLA
ECCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]