Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695885

Identifier: 209695885

GI number: 209695885

Start: 2637189

End: 2638205

Strand: Direct

Name: 209695885

Synonym: VSAL_I2464

Alternate gene names: NA

Gene position: 2637189-2638205 (Clockwise)

Preceding gene: 209695884

Following gene: 209695886

Centisome position: 79.31

GC content: 41.0

Gene sequence:

>1017_bases
ATGTCTAAATATCAAGAAGCAAAACGAATCGTTCGTGCATATTTTGATGCGATAGAAAACGCAACTCACGAAAATGTATC
CGACATACTAAAAGCACACACTTCTGACGATTATTTATGGCGCAGTGTTTATCCATTTCGTGAACAAAAAGGGGCACAAG
CTGCTGCAGATACTTTTTGGTCACCGATACTAAAATCAATGACACGCATGCAACGTCGTCAAGATATCTTCATCGGTGGT
AATAACGAAATTAATCCAGATGAAATTTGGGTAATGAGTATGGGCCACTTTATGGGTCTATTCGATGCTGAATTTTTAGG
TATGCGCCCTACCGGAAAAATAATGAATGTTCGTTATGCTGAATTTAACTGCGTTCAAAATGGAAAAATAACGAAAACAG
GTCTTTTCTTAGACCTTTTAGGCATGATGGACCAAGCGGGTTGCTATCCATTACCCCCTTCAACCGGTAAGCATTTTGTT
TATCCTGGACCACGCAACCATGATGGTCTGTTGTTTGAAGATGCTGCACCAGAAGAAGGAATTGCAACGCTGGCATTGGT
GAATAAAATGGTCGATGACCTTTCAGCCCTTAATGACAGTGGTGCAATGGGATGCCCTCCTGAAGTCTTAGCAAAAAGCT
GGTCTAAAGATATGATTTGGTATGGCCCTTGTGGTATCGGTGCTTCTTACACCATCCCTCGCTACCAACAACAACATCAA
TTACCATTCCGTAATAACTTAAAAGATAAAAAATTCAATGGTCACGTCTGTCGCTTTGCTGAGGGGAATTTTTCGTGTTT
CTTCGGATGGCCAAATCTATCAAATACGCCAACAGGTGGTTTCTTGGGTATGACTGGCGGCGAAGTGCGTGCTGATATGC
AAGTCGTCGATGTGTATTACCGAGATAACGATAAACTGTCTGAAAACTGGGTATTAATCGATCTTCCTTATTGGCTAAAA
CAACAAGGCTTAGATGTTTTTGAACGAACTCAAACAATCATGAATCCTGAGTTGTAA

Upstream 100 bases:

>100_bases
ATAAAAAGCGTAAAACAGCACAAGCCTAATTCAAAATAAGTTACTCACAATCAAAATAGGCGAGCTTCATTAAGCTCGCC
AATATTAAGAGAGAAATAAG

Downstream 100 bases:

>100_bases
TATACCCAAAATAACGAATAATCTTTTAGATTATCGCAACCTTATCCGGTGTGTGCCTTATCATAAATGAGGCACTCTCC
CATCACCGTTTAGACGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSKYQEAKRIVRAYFDAIENATHENVSDILKAHTSDDYLWRSVYPFREQKGAQAAADTFWSPILKSMTRMQRRQDIFIGG
NNEINPDEIWVMSMGHFMGLFDAEFLGMRPTGKIMNVRYAEFNCVQNGKITKTGLFLDLLGMMDQAGCYPLPPSTGKHFV
YPGPRNHDGLLFEDAAPEEGIATLALVNKMVDDLSALNDSGAMGCPPEVLAKSWSKDMIWYGPCGIGASYTIPRYQQQHQ
LPFRNNLKDKKFNGHVCRFAEGNFSCFFGWPNLSNTPTGGFLGMTGGEVRADMQVVDVYYRDNDKLSENWVLIDLPYWLK
QQGLDVFERTQTIMNPEL

Sequences:

>Translated_338_residues
MSKYQEAKRIVRAYFDAIENATHENVSDILKAHTSDDYLWRSVYPFREQKGAQAAADTFWSPILKSMTRMQRRQDIFIGG
NNEINPDEIWVMSMGHFMGLFDAEFLGMRPTGKIMNVRYAEFNCVQNGKITKTGLFLDLLGMMDQAGCYPLPPSTGKHFV
YPGPRNHDGLLFEDAAPEEGIATLALVNKMVDDLSALNDSGAMGCPPEVLAKSWSKDMIWYGPCGIGASYTIPRYQQQHQ
LPFRNNLKDKKFNGHVCRFAEGNFSCFFGWPNLSNTPTGGFLGMTGGEVRADMQVVDVYYRDNDKLSENWVLIDLPYWLK
QQGLDVFERTQTIMNPEL
>Mature_337_residues
SKYQEAKRIVRAYFDAIENATHENVSDILKAHTSDDYLWRSVYPFREQKGAQAAADTFWSPILKSMTRMQRRQDIFIGGN
NEINPDEIWVMSMGHFMGLFDAEFLGMRPTGKIMNVRYAEFNCVQNGKITKTGLFLDLLGMMDQAGCYPLPPSTGKHFVY
PGPRNHDGLLFEDAAPEEGIATLALVNKMVDDLSALNDSGAMGCPPEVLAKSWSKDMIWYGPCGIGASYTIPRYQQQHQL
PFRNNLKDKKFNGHVCRFAEGNFSCFFGWPNLSNTPTGGFLGMTGGEVRADMQVVDVYYRDNDKLSENWVLIDLPYWLKQ
QGLDVFERTQTIMNPEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38352; Mature: 38221

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKYQEAKRIVRAYFDAIENATHENVSDILKAHTSDDYLWRSVYPFREQKGAQAAADTFW
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHCCCHHHHCCCHHHHHHHH
SPILKSMTRMQRRQDIFIGGNNEINPDEIWVMSMGHFMGLFDAEFLGMRPTGKIMNVRYA
HHHHHHHHHHHHHCEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEEE
EFNCVQNGKITKTGLFLDLLGMMDQAGCYPLPPSTGKHFVYPGPRNHDGLLFEDAAPEEG
EEEEECCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCH
IATLALVNKMVDDLSALNDSGAMGCPPEVLAKSWSKDMIWYGPCGIGASYTIPRYQQQHQ
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHCC
LPFRNNLKDKKFNGHVCRFAEGNFSCFFGWPNLSNTPTGGFLGMTGGEVRADMQVVDVYY
CCHHCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEECCCCCCCCCEEEEEEEE
RDNDKLSENWVLIDLPYWLKQQGLDVFERTQTIMNPEL
CCCCCCCCCEEEEECCHHHHHCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
SKYQEAKRIVRAYFDAIENATHENVSDILKAHTSDDYLWRSVYPFREQKGAQAAADTFW
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHCCCHHHHCCCHHHHHHHH
SPILKSMTRMQRRQDIFIGGNNEINPDEIWVMSMGHFMGLFDAEFLGMRPTGKIMNVRYA
HHHHHHHHHHHHHCEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEEE
EFNCVQNGKITKTGLFLDLLGMMDQAGCYPLPPSTGKHFVYPGPRNHDGLLFEDAAPEEG
EEEEECCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCH
IATLALVNKMVDDLSALNDSGAMGCPPEVLAKSWSKDMIWYGPCGIGASYTIPRYQQQHQ
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHCC
LPFRNNLKDKKFNGHVCRFAEGNFSCFFGWPNLSNTPTGGFLGMTGGEVRADMQVVDVYY
CCHHCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEECCCCCCCCCEEEEEEEE
RDNDKLSENWVLIDLPYWLKQQGLDVFERTQTIMNPEL
CCCCCCCCCEEEEECCHHHHHCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA