| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209695789
Identifier: 209695789
GI number: 209695789
Start: 2537072
End: 2537428
Strand: Direct
Name: 209695789
Synonym: VSAL_I2363
Alternate gene names: NA
Gene position: 2537072-2537428 (Clockwise)
Preceding gene: 209695785
Following gene: 209695794
Centisome position: 76.3
GC content: 32.49
Gene sequence:
>357_bases ATGATCAAAAATAAAAAAGAACCAATCTCAGTTGAAACTCAACAAGAAGCAATGAAGGTAGCTAAAGCTACACAAAAACC AGCACAAACAAAAGAACAAACCAAACTCATTGCACAAGGTATTGAGAAAGGGATCACGCTTTACAAAAAACAACATAAAG AAAAAGCACGTGAAGCGGATAAAACAAGGAAAAAAGAAGTTCGACAAAAGCAATTAAATGAATCTAATTCAAACAAAGAA GAAGACAAAAAAGAACACCAAAATAAAACCAATACTCAATCCAATAAACCGTTACCGTGGATATTATTAGGCCTTAGTTG GGTGGGGTTTATTTACTACTTCTTTTTAGGTTATTAA
Upstream 100 bases:
>100_bases CAATCTATAAATCAAAAGCTCTATTCTCATCACATTTTTCTAAGTGTAGACTTTCAAAATATGTAAAAATGCCGTTAATT ATTAATAATAAAGACATATT
Downstream 100 bases:
>100_bases TTGATGAGTCTTAAACAAAAAAAGAGATGAGCCATAAGGGTCATCTCTTTTTTATTAGTTATCTATAGTGGTTACTTATC TACTTTTAAAGATAAAATCC
Product: membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MIKNKKEPISVETQQEAMKVAKATQKPAQTKEQTKLIAQGIEKGITLYKKQHKEKAREADKTRKKEVRQKQLNESNSNKE EDKKEHQNKTNTQSNKPLPWILLGLSWVGFIYYFFLGY
Sequences:
>Translated_118_residues MIKNKKEPISVETQQEAMKVAKATQKPAQTKEQTKLIAQGIEKGITLYKKQHKEKAREADKTRKKEVRQKQLNESNSNKE EDKKEHQNKTNTQSNKPLPWILLGLSWVGFIYYFFLGY >Mature_118_residues MIKNKKEPISVETQQEAMKVAKATQKPAQTKEQTKLIAQGIEKGITLYKKQHKEKAREADKTRKKEVRQKQLNESNSNKE EDKKEHQNKTNTQSNKPLPWILLGLSWVGFIYYFFLGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13807; Mature: 13807
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNKKEPISVETQQEAMKVAKATQKPAQTKEQTKLIAQGIEKGITLYKKQHKEKAREAD CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTRKKEVRQKQLNESNSNKEEDKKEHQNKTNTQSNKPLPWILLGLSWVGFIYYFFLGY HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKNKKEPISVETQQEAMKVAKATQKPAQTKEQTKLIAQGIEKGITLYKKQHKEKAREAD CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTRKKEVRQKQLNESNSNKEEDKKEHQNKTNTQSNKPLPWILLGLSWVGFIYYFFLGY HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA