The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695787

Identifier: 209695787

GI number: 209695787

Start: 2536014

End: 2536403

Strand: Reverse

Name: 209695787

Synonym: VSAL_I2361

Alternate gene names: NA

Gene position: 2536403-2536014 (Counterclockwise)

Preceding gene: 209695788

Following gene: 209695786

Centisome position: 76.28

GC content: 39.23

Gene sequence:

>390_bases
ATGGATTTATCAACAGGTGCACTTCTTTTTAGTGCTTTATTAAGCCCGTTAGCTATGGCTGATTGGCAGCTAGATTTGGG
GTTAGAAATAAATCGCCCTGACTTGCAGCGCATTACTAATTCTTCGACATCTTTAGTGTTGGGCGAAGAGACGCTTGTGT
TCAATTCGATAGATAAGCAGTCCCAAGTGAAAGCATGGGCTGAAATTAAAAATATTAATGCTGAGAATGTAGAAATTGCT
TTTCGGGTGACAGAAGAGGGAAATGGAAGCGTTCGTACATTGTGTGCACCGACAATAATCACTAAATTAAATAATCAAGA
GTCCTATATGGTGTCTGATTCTTCAGCGAATGAGACCGTTAAATTGTCCGTAGAAGTAATTTCTTCGTAA

Upstream 100 bases:

>100_bases
AGAGTGCAGTGGTTATTTTATTACTTAGCTGGTTTTTGATTTTTTTATTCCGAAGCAAAAGAGTCAAAATATGCTTTAGT
CTTACTTAAGAGGGAAGACG

Downstream 100 bases:

>100_bases
TCTCTTATTTATAATCAAACAATCTAATGCTTAATTTCATATAATGAACTCAGTTAATTCAAAATAAGAAAGGAACTGAG
TTCATGTCTTACACTCCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MDLSTGALLFSALLSPLAMADWQLDLGLEINRPDLQRITNSSTSLVLGEETLVFNSIDKQSQVKAWAEIKNINAENVEIA
FRVTEEGNGSVRTLCAPTIITKLNNQESYMVSDSSANETVKLSVEVISS

Sequences:

>Translated_129_residues
MDLSTGALLFSALLSPLAMADWQLDLGLEINRPDLQRITNSSTSLVLGEETLVFNSIDKQSQVKAWAEIKNINAENVEIA
FRVTEEGNGSVRTLCAPTIITKLNNQESYMVSDSSANETVKLSVEVISS
>Mature_129_residues
MDLSTGALLFSALLSPLAMADWQLDLGLEINRPDLQRITNSSTSLVLGEETLVFNSIDKQSQVKAWAEIKNINAENVEIA
FRVTEEGNGSVRTLCAPTIITKLNNQESYMVSDSSANETVKLSVEVISS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14061; Mature: 14061

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSTGALLFSALLSPLAMADWQLDLGLEINRPDLQRITNSSTSLVLGEETLVFNSIDKQ
CCCCHHHHHHHHHHHHHHHCCEEEECCEEECCCHHHHHCCCCCEEEECCCEEEEECCCCH
SQVKAWAEIKNINAENVEIAFRVTEEGNGSVRTLCAPTIITKLNNQESYMVSDSSANETV
HHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCCCEECCCCCCEEEEECCCCCCEE
KLSVEVISS
EEEEEEECC
>Mature Secondary Structure
MDLSTGALLFSALLSPLAMADWQLDLGLEINRPDLQRITNSSTSLVLGEETLVFNSIDKQ
CCCCHHHHHHHHHHHHHHHCCEEEECCEEECCCHHHHHCCCCCEEEECCCEEEEECCCCH
SQVKAWAEIKNINAENVEIAFRVTEEGNGSVRTLCAPTIITKLNNQESYMVSDSSANETV
HHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCCCEECCCCCCEEEEECCCCCCEE
KLSVEVISS
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA