Click here to switch to the map view.

The map label for this gene is yfeX [H]

Identifier: 209695786

GI number: 209695786

Start: 2535025

End: 2535930

Strand: Reverse

Name: yfeX [H]

Synonym: VSAL_I2360

Alternate gene names: 209695786

Gene position: 2535930-2535025 (Counterclockwise)

Preceding gene: 209695787

Following gene: 209695780

Centisome position: 76.26

GC content: 39.74

Gene sequence:

>906_bases
ATGTCTTACACTCCTCAAACTGCATTATTGCCAGAACCAGATCGATTTGCACTGTACGTAACGTTAACTGTGAAAAATAA
TCCTCAACAGGTTTTAGAGCAGCTTCAAGCGTTACCACTTTTGATCTCTGAATTAAATGAAAGCCAACCAGATGCCAATA
TAAGTAGTGCTATTTCTTTTGGTGCTGATTTTTGGGCTACATTGTCTGCACCTATGCCACCAGAGTTATCTAAATTTAAA
GCATTGGGTAAAGGGGATATCATCGCACCAGCGACTCATGGTGATGCGTTTATTCACCTGCATTCAAATCGTCATGATTT
ACACTTTTATATCTTACGTAAATTAATGAGTTCTATTTCTGAATGTATTCAAGTCGATGAAGAAGTTTCTGGTTATCGTT
TTCTTGATTCTCGTGACATGACTGGTTTTGTTGATGGAACAGAAAATCCTAAGAATGAAGCTAGAGCAGAAGTTGCCCTA
ATTGCGGATGGGGAATTTAGTGGTGGCAGTTACATGATGTGTCAGCGCTTCCTTCATAACATACCTGCGTGGAATCGCTT
ATCTGTTTCTGCTCAAGAAAAAGTAATTGGTCGTACTAAGCCTGATTCTATTGAACTAGACGACGTTCCTGCCGCTTCTC
ACGTAGGACGTGTTGATATTAAAGAAAATGGTAAGGGTGTTAAGATTCTACGCCACAGCTTGCCGTATGGCTCGGTCTCA
AGTGATCACGGTCTATTGTTTATTGCGTATTGTCATAGTAAACATAACTTCCAAATTATGTTAGATAGCATGTACGGTGA
AATGGATGGGAAAACGGATCAATTATTACGTTTTACTGATGCCGTTACTGGGGGGTACTTCTTTACTCCATCACAAGAAA
TGCTTGCTGATCTTACCGTTCGATAA

Upstream 100 bases:

>100_bases
AAGTAATTTCTTCGTAATCTCTTATTTATAATCAAACAATCTAATGCTTAATTTCATATAATGAACTCAGTTAATTCAAA
ATAAGAAAGGAACTGAGTTC

Downstream 100 bases:

>100_bases
GTAATCAGCAAACGATAGATATAAAAAAGCCACTATCAAATAGCGGCTTTTTTTTATTCTTTATTTAGCTAACTAATTAT
CTATTAAAAGAAATTACTTA

Product: Dyp-type peroxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MSYTPQTALLPEPDRFALYVTLTVKNNPQQVLEQLQALPLLISELNESQPDANISSAISFGADFWATLSAPMPPELSKFK
ALGKGDIIAPATHGDAFIHLHSNRHDLHFYILRKLMSSISECIQVDEEVSGYRFLDSRDMTGFVDGTENPKNEARAEVAL
IADGEFSGGSYMMCQRFLHNIPAWNRLSVSAQEKVIGRTKPDSIELDDVPAASHVGRVDIKENGKGVKILRHSLPYGSVS
SDHGLLFIAYCHSKHNFQIMLDSMYGEMDGKTDQLLRFTDAVTGGYFFTPSQEMLADLTVR

Sequences:

>Translated_301_residues
MSYTPQTALLPEPDRFALYVTLTVKNNPQQVLEQLQALPLLISELNESQPDANISSAISFGADFWATLSAPMPPELSKFK
ALGKGDIIAPATHGDAFIHLHSNRHDLHFYILRKLMSSISECIQVDEEVSGYRFLDSRDMTGFVDGTENPKNEARAEVAL
IADGEFSGGSYMMCQRFLHNIPAWNRLSVSAQEKVIGRTKPDSIELDDVPAASHVGRVDIKENGKGVKILRHSLPYGSVS
SDHGLLFIAYCHSKHNFQIMLDSMYGEMDGKTDQLLRFTDAVTGGYFFTPSQEMLADLTVR
>Mature_300_residues
SYTPQTALLPEPDRFALYVTLTVKNNPQQVLEQLQALPLLISELNESQPDANISSAISFGADFWATLSAPMPPELSKFKA
LGKGDIIAPATHGDAFIHLHSNRHDLHFYILRKLMSSISECIQVDEEVSGYRFLDSRDMTGFVDGTENPKNEARAEVALI
ADGEFSGGSYMMCQRFLHNIPAWNRLSVSAQEKVIGRTKPDSIELDDVPAASHVGRVDIKENGKGVKILRHSLPYGSVSS
DHGLLFIAYCHSKHNFQIMLDSMYGEMDGKTDQLLRFTDAVTGGYFFTPSQEMLADLTVR

Specific function: Unknown

COG id: COG2837

COG function: function code P; Predicted iron-dependent peroxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DyP-type peroxidase family [H]

Homologues:

Organism=Escherichia coli, GI87082102, Length=297, Percent_Identity=44.7811447811448, Blast_Score=262, Evalue=2e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR006314 [H]

Pfam domain/function: PF04261 Dyp_perox [H]

EC number: NA

Molecular weight: Translated: 33412; Mature: 33281

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYTPQTALLPEPDRFALYVTLTVKNNPQQVLEQLQALPLLISELNESQPDANISSAISF
CCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHC
GADFWATLSAPMPPELSKFKALGKGDIIAPATHGDAFIHLHSNRHDLHFYILRKLMSSIS
CCHHHEECCCCCCCCHHHHHHCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHH
ECIQVDEEVSGYRFLDSRDMTGFVDGTENPKNEARAEVALIADGEFSGGSYMMCQRFLHN
HHHHHHHHCCCEEEECCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHC
IPAWNRLSVSAQEKVIGRTKPDSIELDDVPAASHVGRVDIKENGKGVKILRHSLPYGSVS
CCCCCEEECCHHHHHHCCCCCCCCCCCCCCCHHHCCEEEECCCCCCEEEEEECCCCCCCC
SDHGLLFIAYCHSKHNFQIMLDSMYGEMDGKTDQLLRFTDAVTGGYFFTPSQEMLADLTV
CCCCEEEEEEECCCCCEEEEEECHHCCCCCCHHHHHHHHHHHCCCEEECCCHHHHHHCCC
R
C
>Mature Secondary Structure 
SYTPQTALLPEPDRFALYVTLTVKNNPQQVLEQLQALPLLISELNESQPDANISSAISF
CCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHC
GADFWATLSAPMPPELSKFKALGKGDIIAPATHGDAFIHLHSNRHDLHFYILRKLMSSIS
CCHHHEECCCCCCCCHHHHHHCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHH
ECIQVDEEVSGYRFLDSRDMTGFVDGTENPKNEARAEVALIADGEFSGGSYMMCQRFLHN
HHHHHHHHCCCEEEECCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHC
IPAWNRLSVSAQEKVIGRTKPDSIELDDVPAASHVGRVDIKENGKGVKILRHSLPYGSVS
CCCCCEEECCHHHHHHCCCCCCCCCCCCCCCHHHCCEEEECCCCCCEEEEEECCCCCCCC
SDHGLLFIAYCHSKHNFQIMLDSMYGEMDGKTDQLLRFTDAVTGGYFFTPSQEMLADLTV
CCCCEEEEEEECCCCCEEEEEECHHCCCCCCHHHHHHHHHHHCCCEEECCCHHHHHHCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]