The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is flgA

Identifier: 209695768

GI number: 209695768

Start: 2515559

End: 2516305

Strand: Direct

Name: flgA

Synonym: VSAL_I2341

Alternate gene names: NA

Gene position: 2515559-2516305 (Clockwise)

Preceding gene: 209695750

Following gene: 209695769

Centisome position: 75.65

GC content: 39.09

Gene sequence:

>747_bases
ATGGCATTTTATAATAAAAATATGATGATAATTAAAAAGCGTGATAACAAAATCACTTTTTATCGACTTATAAGCTTTAT
CGGCCTATTTATAAGTTTCTTTAATACTAATGCGCATGCTGCCACAGATGAGCAACTTGAAGCAATTAAAGACTCTGCGG
AGTCTTTTCTAGAATCTCAAATTGAAGTGCCGAGTAATGGCACATTAAGTCTAGAGTCCGCGCGAATAGATAGTAGAATT
CATGCGACAGACTGTCCAGAACCTTTAACGTCCTCCTTGCCTGGTCGACTTAATTCCAGTGGTAATACATCCGTATTAGT
GGAATGTATTGCAGATAATTGGAAGATCTATGTCCCTGTAAAAGCAGAATTAATGATGCCTTTAGTCACGGCGGCAACGT
CTCTTTCAAAAGGACTCACACTCAGCGCAAATGACTTAAATTTAACCTTAGTCAACAGCCGAACGTATCGCCGAGGCGGC
TATATTAATACGAATGATCTTATTGGGTCACGAATTAAACGCAGCGTTCGAGCCGGTGATGTTGTTGAAAAAAACGACAT
CTGCATGGTATGTCGCAATGACAGTGTTATAATTAAAGCGGTAAAAGGGGAATTAAGTATCCTAACTAAAGGAACAGCAT
TGGGTGACGCGGCTTTGGGCGATAATGTAAACGTCCAAAATAACAAATCTAAACGCATCATCAATGGCGTTGTTACTGCG
GTAGGTGAAATTAGTATTCGATTTTAA

Upstream 100 bases:

>100_bases
TTCACCGAATCCAGTATGCCTGTCATATATGACTCCATCTTGTGCCATGATAAATAAACCGCGAGCCTAACACAAACCCA
TCAAGAGCACGGCATACCAT

Downstream 100 bases:

>100_bases
GCCAGAATGTTAATTTGACTTAAATTTAATGATATTTCCTCTAAACTTTCTTAACACACCGCCGATAAGTGGAAACTGGC
ATTATTTATGCTTAGTTTAA

Product: flagellar basal body P-ring biosynthesis protein FlgA

Products: NA

Alternate protein names: Flagella Basal Body P-Ring Formation Protein FlgA; Flagellar Basal Body P-Ring Biosynthesis Protein; Flagellar Basal-Body P-Ring Formation Protein FlgA; Flageller Protein FlgA; Flagellar Biosynthesis; SAF Domain-Containing Protein; Flagellar Protein; Flagellar Basal Body P-Ring Biosynthesis Protein-Like

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MAFYNKNMMIIKKRDNKITFYRLISFIGLFISFFNTNAHAATDEQLEAIKDSAESFLESQIEVPSNGTLSLESARIDSRI
HATDCPEPLTSSLPGRLNSSGNTSVLVECIADNWKIYVPVKAELMMPLVTAATSLSKGLTLSANDLNLTLVNSRTYRRGG
YINTNDLIGSRIKRSVRAGDVVEKNDICMVCRNDSVIIKAVKGELSILTKGTALGDAALGDNVNVQNNKSKRIINGVVTA
VGEISIRF

Sequences:

>Translated_248_residues
MAFYNKNMMIIKKRDNKITFYRLISFIGLFISFFNTNAHAATDEQLEAIKDSAESFLESQIEVPSNGTLSLESARIDSRI
HATDCPEPLTSSLPGRLNSSGNTSVLVECIADNWKIYVPVKAELMMPLVTAATSLSKGLTLSANDLNLTLVNSRTYRRGG
YINTNDLIGSRIKRSVRAGDVVEKNDICMVCRNDSVIIKAVKGELSILTKGTALGDAALGDNVNVQNNKSKRIINGVVTA
VGEISIRF
>Mature_247_residues
AFYNKNMMIIKKRDNKITFYRLISFIGLFISFFNTNAHAATDEQLEAIKDSAESFLESQIEVPSNGTLSLESARIDSRIH
ATDCPEPLTSSLPGRLNSSGNTSVLVECIADNWKIYVPVKAELMMPLVTAATSLSKGLTLSANDLNLTLVNSRTYRRGGY
INTNDLIGSRIKRSVRAGDVVEKNDICMVCRNDSVIIKAVKGELSILTKGTALGDAALGDNVNVQNNKSKRIINGVVTAV
GEISIRF

Specific function: Unknown

COG id: COG1261

COG function: function code NO; Flagellar basal body P-ring biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27093; Mature: 26962

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFYNKNMMIIKKRDNKITFYRLISFIGLFISFFNTNAHAATDEQLEAIKDSAESFLESQ
CEEECCCEEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IEVPSNGTLSLESARIDSRIHATDCPEPLTSSLPGRLNSSGNTSVLVECIADNWKIYVPV
CCCCCCCEEEEECCCCCCEEECCCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEE
KAELMMPLVTAATSLSKGLTLSANDLNLTLVNSRTYRRGGYINTNDLIGSRIKRSVRAGD
HHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCEECCCCCCCCHHHHHHHHHHHHHCCC
VVEKNDICMVCRNDSVIIKAVKGELSILTKGTALGDAALGDNVNVQNNKSKRIINGVVTA
CEECCCEEEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
VGEISIRF
HEEEEEEC
>Mature Secondary Structure 
AFYNKNMMIIKKRDNKITFYRLISFIGLFISFFNTNAHAATDEQLEAIKDSAESFLESQ
EEECCCEEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IEVPSNGTLSLESARIDSRIHATDCPEPLTSSLPGRLNSSGNTSVLVECIADNWKIYVPV
CCCCCCCEEEEECCCCCCEEECCCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEE
KAELMMPLVTAATSLSKGLTLSANDLNLTLVNSRTYRRGGYINTNDLIGSRIKRSVRAGD
HHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCEECCCCCCCCHHHHHHHHHHHHHCCC
VVEKNDICMVCRNDSVIIKAVKGELSILTKGTALGDAALGDNVNVQNNKSKRIINGVVTA
CEECCCEEEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
VGEISIRF
HEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA