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The map label for this gene is fliD [H]

Identifier: 209695746

GI number: 209695746

Start: 2487381

End: 2489321

Strand: Reverse

Name: fliD [H]

Synonym: VSAL_I2315

Alternate gene names: 209695746

Gene position: 2489321-2487381 (Counterclockwise)

Preceding gene: 209695747

Following gene: 209695745

Centisome position: 74.86

GC content: 42.61

Gene sequence:

>1941_bases
ATGAGTATGAGCCCGATGGGGATGGGTGGTGGCCTAGATATTAATTCTATGGTGAGCAAAATAGTTGAAAGCGAGCGCTT
ACCAAAGCAGCAGCGCATCGACCGTGAGCGTTCAGACATAGACATGAATATCAGTGGTTATGGTCGTCTGCAAGAATCGT
TAGATACTATGAAAACTCTGATGGCGACTTTTCGTCAAGAGGATACGTTTGCCTCGAGAAGTGTGAATACCAGTAATGAA
GATGCCGTTCATGCCACTGCATCACCAGATGCGCTTGCCGGTAAATACTCGATTGATGTATTGCAATTGGCACAAGCACA
AAAGTTAGCATCGTCCCCAGTAAAAGAGGACGCAAGATTTGGCCCTGGTGAATTAACGATTCATCTTGGTGAAAAAGAGT
TCTCACTGACGGTCGTTGGTGATCAGAATAAAATCACCGACATTGTACGACAAATTAACAGCGCGCCTGGTAATCCGGGA
GTGCAGTCTTCTATAGTTAAAGACGATGGCGGATCTCGTCTGATTCTTGCCTCTGACAAACCAGGGGAAAGCAATGAAAT
CAAAATCGATGTAAAAGCTAAATATAATAATACATTGCATCGTTTTGGATTTAATCCTGATTTTGATCCTTCAGTGTCGA
CTGAATACGATATTCCGACGTTATTAGCGCAACAATCTCCTCAAGCGCCAGTTCAAATAACAAAAGAAGAAGTGAAAGAT
CTGTCAGATGAAGAGAAATTTGCTTATTTCAAACCACTTATTGATAACGCAAAACGTGAGACGGCTGAACTTGATCAAGC
GGCAAAAGAAATCGTTCAGCAGCAAGAAGCGACAGCGGCATTGTCTACGTTAGAAGACCCAACGGATCCTACCTCTGGCA
TGTCTGGTTGGAGTGAAAGAACAGCAGGTACATTACAAGCCGCATTACCAAGTGCTGATGAAAAAATTGAATTAGCAAAA
GCGGCAAAGCAAGGCGATCAATCAGCCGCTGAAGCCCTTGCCGAAATTGGACAAACACCTGACACCGTATTTAATGCCGC
AGGCATTACTTATGAACCATCTCAACCTGCGCCAAAGAAAGACGTCGTTGAGATAGCAAAAGAAAAAATTGAACAAGTTC
CTACTGCACTTAAAGAAATAGCGAAGAAAAAGCTAGAGCCCATTGAAGATTTAGTGGATCAAATGAAGCCAAGAAAGCCC
CTTTATTCAGGGCTTCAAGAAGTGCAATCGGCAACCAGTGCTAAAGTGGTATTAGATGGTGTAGCTCGAATTAGTAGTGA
CACCAATGTTATTCAAGATGCAATTCAAGGCATTGATTTAACATTAAAGAATACAACCACAAAAGACGGTAAACGTGTTG
AATTAGACGTTGAGTTTGACCGAGCGAGTGTGAAAGCCGCTATCGAGCAGTTTGTAACAACCTATAACCAGTTTTATCAA
ACCACGCAATCACTGAGTGGGTTTGATCCTGCGACAGGGCAAAGTGGTCCATTGGCTGGGGACAGTGTCGTTCGTTCTGC
TGAATCTCGTTTAAAGTCAGTCTTTGTTGCTCCAGTAGAATCGGCACCTAAAGGGATAAAAACCTTGATCGAGCTTGGTA
TCTCAACCACTCGTCAAGGCTCTTTAGAAATCAATGATGCAATGCTTGATCGTCAATTGAATGAGAACTTCAGTCAAATG
CACACATTTTTTGACGGTTCTAAAGGTTTTGCTAAAAAAGTTGAAGACGTTATTCAAAGTATGACTGGGGTCGCGGGGCC
AATTCGTACACGTATGAATACGTTACGTGATCAGAATTACCGTTTAAATGATCAACAAGTTGATTTAGATCGTCGAATGG
ACAGCGTTCAAGAGCGAACTCGCAATAAATTTGCCAACATGCAAGATGTGACAGGGAAAATGAAAGCCCAATTGTCTGGC
ATGATGAATGCGTTAGGTTAA

Upstream 100 bases:

>100_bases
CCCCGACGAAAAGATGTTGGAAGTTGCTAGAGATCTTGCTGCTAGTGCATCAGGGTTAATCGCAATGAAGATATAAACCA
TTAATTGAGGAAAACGATTC

Downstream 100 bases:

>100_bases
CAAGTAGAGTAGAAGCCCAAAAAGGTGTTACCGATGGATTTATTAGCAAAATTAAACGAATTAGATCAGCAATTACAACA
AGAATATCAAGCCCACGATA

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 646; Mature: 645

Protein sequence:

>646_residues
MSMSPMGMGGGLDINSMVSKIVESERLPKQQRIDRERSDIDMNISGYGRLQESLDTMKTLMATFRQEDTFASRSVNTSNE
DAVHATASPDALAGKYSIDVLQLAQAQKLASSPVKEDARFGPGELTIHLGEKEFSLTVVGDQNKITDIVRQINSAPGNPG
VQSSIVKDDGGSRLILASDKPGESNEIKIDVKAKYNNTLHRFGFNPDFDPSVSTEYDIPTLLAQQSPQAPVQITKEEVKD
LSDEEKFAYFKPLIDNAKRETAELDQAAKEIVQQQEATAALSTLEDPTDPTSGMSGWSERTAGTLQAALPSADEKIELAK
AAKQGDQSAAEALAEIGQTPDTVFNAAGITYEPSQPAPKKDVVEIAKEKIEQVPTALKEIAKKKLEPIEDLVDQMKPRKP
LYSGLQEVQSATSAKVVLDGVARISSDTNVIQDAIQGIDLTLKNTTTKDGKRVELDVEFDRASVKAAIEQFVTTYNQFYQ
TTQSLSGFDPATGQSGPLAGDSVVRSAESRLKSVFVAPVESAPKGIKTLIELGISTTRQGSLEINDAMLDRQLNENFSQM
HTFFDGSKGFAKKVEDVIQSMTGVAGPIRTRMNTLRDQNYRLNDQQVDLDRRMDSVQERTRNKFANMQDVTGKMKAQLSG
MMNALG

Sequences:

>Translated_646_residues
MSMSPMGMGGGLDINSMVSKIVESERLPKQQRIDRERSDIDMNISGYGRLQESLDTMKTLMATFRQEDTFASRSVNTSNE
DAVHATASPDALAGKYSIDVLQLAQAQKLASSPVKEDARFGPGELTIHLGEKEFSLTVVGDQNKITDIVRQINSAPGNPG
VQSSIVKDDGGSRLILASDKPGESNEIKIDVKAKYNNTLHRFGFNPDFDPSVSTEYDIPTLLAQQSPQAPVQITKEEVKD
LSDEEKFAYFKPLIDNAKRETAELDQAAKEIVQQQEATAALSTLEDPTDPTSGMSGWSERTAGTLQAALPSADEKIELAK
AAKQGDQSAAEALAEIGQTPDTVFNAAGITYEPSQPAPKKDVVEIAKEKIEQVPTALKEIAKKKLEPIEDLVDQMKPRKP
LYSGLQEVQSATSAKVVLDGVARISSDTNVIQDAIQGIDLTLKNTTTKDGKRVELDVEFDRASVKAAIEQFVTTYNQFYQ
TTQSLSGFDPATGQSGPLAGDSVVRSAESRLKSVFVAPVESAPKGIKTLIELGISTTRQGSLEINDAMLDRQLNENFSQM
HTFFDGSKGFAKKVEDVIQSMTGVAGPIRTRMNTLRDQNYRLNDQQVDLDRRMDSVQERTRNKFANMQDVTGKMKAQLSG
MMNALG
>Mature_645_residues
SMSPMGMGGGLDINSMVSKIVESERLPKQQRIDRERSDIDMNISGYGRLQESLDTMKTLMATFRQEDTFASRSVNTSNED
AVHATASPDALAGKYSIDVLQLAQAQKLASSPVKEDARFGPGELTIHLGEKEFSLTVVGDQNKITDIVRQINSAPGNPGV
QSSIVKDDGGSRLILASDKPGESNEIKIDVKAKYNNTLHRFGFNPDFDPSVSTEYDIPTLLAQQSPQAPVQITKEEVKDL
SDEEKFAYFKPLIDNAKRETAELDQAAKEIVQQQEATAALSTLEDPTDPTSGMSGWSERTAGTLQAALPSADEKIELAKA
AKQGDQSAAEALAEIGQTPDTVFNAAGITYEPSQPAPKKDVVEIAKEKIEQVPTALKEIAKKKLEPIEDLVDQMKPRKPL
YSGLQEVQSATSAKVVLDGVARISSDTNVIQDAIQGIDLTLKNTTTKDGKRVELDVEFDRASVKAAIEQFVTTYNQFYQT
TQSLSGFDPATGQSGPLAGDSVVRSAESRLKSVFVAPVESAPKGIKTLIELGISTTRQGSLEINDAMLDRQLNENFSQMH
TFFDGSKGFAKKVEDVIQSMTGVAGPIRTRMNTLRDQNYRLNDQQVDLDRRMDSVQERTRNKFANMQDVTGKMKAQLSGM
MNALG

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=235, Percent_Identity=26.8085106382979, Blast_Score=63, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 70469; Mature: 70338

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMSPMGMGGGLDINSMVSKIVESERLPKQQRIDRERSDIDMNISGYGRLQESLDTMKTL
CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHH
MATFRQEDTFASRSVNTSNEDAVHATASPDALAGKYSIDVLQLAQAQKLASSPVKEDARF
HHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHCCCHHHHHHHHHHHHHHHCCCCHHHCCC
GPGELTIHLGEKEFSLTVVGDQNKITDIVRQINSAPGNPGVQSSIVKDDGGSRLILASDK
CCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEECCC
PGESNEIKIDVKAKYNNTLHRFGFNPDFDPSVSTEYDIPTLLAQQSPQAPVQITKEEVKD
CCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEECHHHHHC
LSDEEKFAYFKPLIDNAKRETAELDQAAKEIVQQQEATAALSTLEDPTDPTSGMSGWSER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
TAGTLQAALPSADEKIELAKAAKQGDQSAAEALAEIGQTPDTVFNAAGITYEPSQPAPKK
HHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCCEECCCCCCCHH
DVVEIAKEKIEQVPTALKEIAKKKLEPIEDLVDQMKPRKPLYSGLQEVQSATSAKVVLDG
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VARISSDTNVIQDAIQGIDLTLKNTTTKDGKRVELDVEFDRASVKAAIEQFVTTYNQFYQ
HHHHCCCHHHHHHHHCCCEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHH
TTQSLSGFDPATGQSGPLAGDSVVRSAESRLKSVFVAPVESAPKGIKTLIELGISTTRQG
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHCCCCCCCC
SLEINDAMLDRQLNENFSQMHTFFDGSKGFAKKVEDVIQSMTGVAGPIRTRMNTLRDQNY
CEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
RLNDQQVDLDRRMDSVQERTRNKFANMQDVTGKMKAQLSGMMNALG
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SMSPMGMGGGLDINSMVSKIVESERLPKQQRIDRERSDIDMNISGYGRLQESLDTMKTL
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHH
MATFRQEDTFASRSVNTSNEDAVHATASPDALAGKYSIDVLQLAQAQKLASSPVKEDARF
HHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHCCCHHHHHHHHHHHHHHHCCCCHHHCCC
GPGELTIHLGEKEFSLTVVGDQNKITDIVRQINSAPGNPGVQSSIVKDDGGSRLILASDK
CCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEECCC
PGESNEIKIDVKAKYNNTLHRFGFNPDFDPSVSTEYDIPTLLAQQSPQAPVQITKEEVKD
CCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEECHHHHHC
LSDEEKFAYFKPLIDNAKRETAELDQAAKEIVQQQEATAALSTLEDPTDPTSGMSGWSER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
TAGTLQAALPSADEKIELAKAAKQGDQSAAEALAEIGQTPDTVFNAAGITYEPSQPAPKK
HHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCCEECCCCCCCHH
DVVEIAKEKIEQVPTALKEIAKKKLEPIEDLVDQMKPRKPLYSGLQEVQSATSAKVVLDG
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VARISSDTNVIQDAIQGIDLTLKNTTTKDGKRVELDVEFDRASVKAAIEQFVTTYNQFYQ
HHHHCCCHHHHHHHHCCCEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHH
TTQSLSGFDPATGQSGPLAGDSVVRSAESRLKSVFVAPVESAPKGIKTLIELGISTTRQG
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHCCCCCCCC
SLEINDAMLDRQLNENFSQMHTFFDGSKGFAKKVEDVIQSMTGVAGPIRTRMNTLRDQNY
CEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
RLNDQQVDLDRRMDSVQERTRNKFANMQDVTGKMKAQLSGMMNALG
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]