| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209695694
Identifier: 209695694
GI number: 209695694
Start: 2433354
End: 2433596
Strand: Direct
Name: 209695694
Synonym: VSAL_I2259
Alternate gene names: NA
Gene position: 2433354-2433596 (Clockwise)
Preceding gene: 209695693
Following gene: 209695695
Centisome position: 73.18
GC content: 39.92
Gene sequence:
>243_bases ATGATACTCACTGAGCTTAAGCAATATATTGATGAAGAGGGTCGGGTTGAAAGACTGACTCTCGCGAAAAAGTTCAGTAT GAGTGAAGATGGTGTTGATGCAATGCTTGATCTATGGGTAAAAAAAGGAAAGTTAACCCGTGAATTAATCGGTTGTGATA AGACACAATGCTGCCAAGAAGCCGAGCGTGTTTGGTATCGACCGGTTTATAAAGATGAGTTAATGACCACTTACATACGA TAA
Upstream 100 bases:
>100_bases GCAGTATGTGGATTGCGATTTCACTAGCTGCAATGGCTGTAACTTATTTAGCGTTGAAGAGAAAGAGTCGAGAGGTTGAA AACCAAGAGGCGGCATTAGT
Downstream 100 bases:
>100_bases TCATCCAGTTTACAGTAGGATGATAAATAAAAACGAGAGCCAATAGGTTCTCGTTTTTTTATGGGCGAAAGGTAAGCGTG CGGGGAACTACACCTAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MILTELKQYIDEEGRVERLTLAKKFSMSEDGVDAMLDLWVKKGKLTRELIGCDKTQCCQEAERVWYRPVYKDELMTTYIR
Sequences:
>Translated_80_residues MILTELKQYIDEEGRVERLTLAKKFSMSEDGVDAMLDLWVKKGKLTRELIGCDKTQCCQEAERVWYRPVYKDELMTTYIR >Mature_80_residues MILTELKQYIDEEGRVERLTLAKKFSMSEDGVDAMLDLWVKKGKLTRELIGCDKTQCCQEAERVWYRPVYKDELMTTYIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9510; Mature: 9510
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTELKQYIDEEGRVERLTLAKKFSMSEDGVDAMLDLWVKKGKLTRELIGCDKTQCCQE CCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHH AERVWYRPVYKDELMTTYIR HHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure MILTELKQYIDEEGRVERLTLAKKFSMSEDGVDAMLDLWVKKGKLTRELIGCDKTQCCQE CCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHH AERVWYRPVYKDELMTTYIR HHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA