| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209695547
Identifier: 209695547
GI number: 209695547
Start: 2252901
End: 2253158
Strand: Reverse
Name: 209695547
Synonym: VSAL_I2103
Alternate gene names: NA
Gene position: 2253158-2252901 (Counterclockwise)
Preceding gene: 209695548
Following gene: 209695546
Centisome position: 67.76
GC content: 34.88
Gene sequence:
>258_bases ATGGAAGCATTACACAACGAACTTAAATTATTAATCATTGAAGCATTAAATCTAGAAGATATTTCAGTGGATGATATTGA AACAGAAGCCCCTTTGTTTGGCGATGGCTTAGGTCTAGATTCAATTGATGCGTTAGAATTGGGTTTAGCGATTAAGAAAA AATACAACTTAGTGTTAGATGCTGATGATACCAATACACGTGAACATTTTGCATCAGTGGCTAATTTAGCGGCTTACATT ACTGAAAATAAGGCGTAG
Upstream 100 bases:
>100_bases TCATTGCCATCAGCCGCTCGAAATTTTAATCGATTTTTAGATACAGCTTTGTATCCAATAAATGAATTTAACTCATCAAA CGAAAAAAAGTAGGTCATTG
Downstream 100 bases:
>100_bases AAACTAAAATGACTGATGTGAATAAAGAACAAGTATTAGAGCAAGTGACGTCTGCGCTGGTTGAGTTATTTGAAATTGAT GCTGCTGACATTACGTTGGA
Product: acyl carrier protein
Products: NA
Alternate protein names: Acyl-Carrier Protein; Acyl-Carrier-Protein; Acyl Carrier Domain-Containing Protein; Acyl Carrier Protein Component; Acyl-Carrier ProteiN-Like Protein; Acyl Carrier Protein AcpC; Acyl-Carrier Protein-Like Protein
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MEALHNELKLLIIEALNLEDISVDDIETEAPLFGDGLGLDSIDALELGLAIKKKYNLVLDADDTNTREHFASVANLAAYI TENKA
Sequences:
>Translated_85_residues MEALHNELKLLIIEALNLEDISVDDIETEAPLFGDGLGLDSIDALELGLAIKKKYNLVLDADDTNTREHFASVANLAAYI TENKA >Mature_85_residues MEALHNELKLLIIEALNLEDISVDDIETEAPLFGDGLGLDSIDALELGLAIKKKYNLVLDADDTNTREHFASVANLAAYI TENKA
Specific function: Unknown
COG id: COG0236
COG function: function code IQ; Acyl carrier protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9284; Mature: 9284
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: PS50075 ACP_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEALHNELKLLIIEALNLEDISVDDIETEAPLFGDGLGLDSIDALELGLAIKKKYNLVLD CCCHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCEEEE ADDTNTREHFASVANLAAYITENKA CCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEALHNELKLLIIEALNLEDISVDDIETEAPLFGDGLGLDSIDALELGLAIKKKYNLVLD CCCHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCEEEE ADDTNTREHFASVANLAAYITENKA CCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA